C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166710-ENSG00000185880 CGP 9606 15:44711477-44767829
GeneTranscriptPositionBiotype
ENSG00000166710 (B2M)
beta-2-microglobulin 		ENST00000349264 (B2M-007) 44711517-44718067 nonsense_mediated_decay
ENST00000544417 (B2M-201) 44711487-44718159 protein_coding
ENST00000557901 (B2M-003) 44711519-44717622 nonsense_mediated_decay
ENST00000558401 (B2M-001) 44711477-44718877 protein_coding
ENST00000559220 (B2M-012) 44714507-44718144 processed_transcript
ENST00000559720 (B2M-002) 44711487-44717765 nonsense_mediated_decay
ENST00000559907 (B2M-008) 44711927-44717704 processed_transcript
ENST00000559916 (B2M-006) 44711513-44717029 protein_coding
ENST00000560556 (B2M-010) 44715726-44716939 processed_transcript
ENST00000560681 (B2M-009) 44711959-44716559 retained_intron
ENST00000561139 (B2M-011) 44715500-44718145 nonsense_mediated_decay
ENST00000561424 (B2M-013) 44711509-44718851 nonsense_mediated_decay
ENST00000623550 (B2M-005) 44715817-44718145 TEC
ENSG00000185880 (TRIM69)
tripartite motif containing 69 		ENST00000329464 (TRIM69-201) 44736362-44767827 protein_coding
ENST00000338264 (TRIM69-001) 44736566-44767829 protein_coding
ENST00000558173 (TRIM69-006) 44752918-44767827 protein_coding
ENST00000558329 (TRIM69-004) 44736530-44767825 protein_coding
ENST00000559315 (TRIM69-008) 44729073-44736562 processed_transcript
ENST00000559390 (TRIM69-002) 44728988-44767827 protein_coding
ENST00000560141 (TRIM69-005) 44729001-44734000 processed_transcript
ENST00000560442 (TRIM69-003) 44736530-44767825 protein_coding
ENST00000560554 (TRIM69-007) 44729055-44736613 processed_transcript
ENST00000561043 (TRIM69-010) 44736535-44767827 protein_coding
ENST00000561170 (TRIM69-011) 44758774-44767443 protein_coding
ENST00000561237 (TRIM69-009) 44729142-44731715 processed_transcript
CIL_0004DL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060802-ENSMUSG00000033368 CGP 10090 2:122147686-122179027
GeneTranscriptPositionBiotype
ENSMUSG00000033368 (Trim69)
tripartite motif-containing 69 		ENSMUST00000036089 (Trim69-001) 122160700-122179027 protein_coding
ENSMUST00000143088 (Trim69-002) 122160802-122179024 processed_transcript
ENSMUSG00000060802 (B2m)
beta-2 microglobulin 		ENSMUST00000102476 (B2m-001) 122147686-122153083 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DL_0001ENSG00000166710ENST00000349264ENST00000544417ENST00000557901ENST00000558401ENST00000559220ENST00000559720ENST00000559907ENST00000559916ENST00000560556ENST00000560681ENST00000561139ENST00000561424ENST00000623550ENSG00000185880ENST00000329464ENST00000338264ENST00000558173ENST00000558329ENST00000559315ENST00000559390ENST00000560141ENST00000560442ENST00000560554ENST00000561043ENST00000561170ENST00000561237CIL_0004DL_0002ENSMUSG00000033368ENSMUST00000036089ENSMUST00000143088ENSMUSG00000060802ENSMUST00000102476
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DL_0001ENSG00000166710ENST00000349264ENST00000544417ENST00000557901ENST00000559220ENST00000561139ENST00000561424ENSG00000185880ENST00000329464ENST00000338264ENST00000559315ENST00000560141ENST00000561043ENST00000561170ENST00000561237CIL_0004DL_0002ENSMUSG00000033368ENSMUST00000036089ENSMUST00000143088ENSMUSG00000060802ENSMUST00000102476
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166710 ENST00000349264 402.493±0.00 654.770±0.00 N/A 95.886±0.00 292.787±0.00 344.475±0.00 330.623±0.00 470.359±0.00 416.278±0.00 1965.080±0.00 124.360±0.00 380.064±119.67 476.106±21.29 128.863±76.69
ENST00000544417 736.610±0.00 932.619±0.00 31.262±0.00 138.718±94.62 476.949±256.72 413.579±261.17 107.674±51.25 318.549±156.40 183.171±55.37 769.464±415.90 49.623±23.65 283.558±70.40 357.561±0.00 585.615±0.00
ENST00000557901 930.183±0.00 1177.300±0.00 N/A 214.697±0.00 881.740±0.00 600.540±0.00 432.658±0.00 609.782±0.00 582.348±0.00 3840.220±0.00 162.687±0.00 641.195±0.00 552.763±0.00 242.065±180.88
ENST00000558401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559220 N/A N/A 130.614±0.00 213.314±0.00 733.994±0.00 649.898±0.00 142.438±0.00 668.755±0.00 385.319±0.00 977.542±0.00 115.116±0.00 645.450±107.25 860.827±439.22 N/A
ENST00000559720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 362.689±0.00 388.036±0.00 35.326±0.00
ENST00000561424 N/A N/A 56.731±0.00 67.752±0.00 419.327±0.00 274.356±0.00 75.116±0.00 310.585±0.00 173.178±0.00 543.797±0.00 73.335±0.00 612.292±206.45 1105.340±105.06 N/A
ENST00000623550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185880 ENST00000329464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.780±11.85
ENST00000338264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.364±7.46
ENST00000558173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559315 N/A N/A N/A N/A N/A N/A N/A 3.350±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560141 7.263±0.00 7.152±0.00 2.472±0.00 9.328±1.04 5.019±0.98 7.365±4.62 12.020±6.66 6.819±6.36 3.296±1.34 10.700±5.01 6.672±0.35 7.165±2.98 6.685±0.70 6.567±0.00
ENST00000560442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.233±0.00
ENST00000561170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 218.038±0.00
ENST00000561237 N/A N/A N/A N/A 5.460±0.00 4.789±0.00 N/A N/A 8.633±0.00 N/A N/A 6.260±1.42 5.623±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033368 ENSMUST00000036089 0.101±0.04 0.066±0.00 0.023±0.01 0.008±0.00 0.070±0.02 N/A 0.027±0.02 0.036±0.03 0.064±0.03 0.063±0.04 0.030±0.01 0.090±0.04 0.154±0.07 65.145±22.11
ENSMUST00000143088 0.011±0.01 0.051±0.00 N/A N/A 0.108±0.00 N/A 0.018±0.00 0.037±0.03 0.012±0.00 0.034±0.00 N/A N/A 0.218±0.00 N/A
ENSMUSG00000060802 ENSMUST00000102476 1282.028±410.99 1355.892±133.95 356.093±15.47 12.911±5.85 1588.861±583.88 584.213±64.99 229.822±98.90 444.797±71.23 976.003±767.96 874.900±409.36 56.827±13.59 309.283±100.95 178.765±90.74 54.589±48.43

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