C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysosomal-associated membrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185896 LAMP1 9606 + 13:113297241-113323672 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332556 LAMP1-001 113297241-113323672 protein_coding
  ENST00000471046 LAMP1-002 113321767-113322594 processed_transcript
  ENST00000472564 LAMP1-003 113304932-113323430 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332556ENST00000472564
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332556 150.371±0.00 116.135±0.00 14.838±0.00 52.886±38.95 71.739±55.07 52.856±43.50 24.855±20.04 81.377±49.46 57.772±39.67 71.938±57.09 24.372±21.95 95.843±45.62 168.271±20.53 113.977±21.31
ENST00000472564 N/A N/A N/A N/A 1.065±0.00 N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QK CIL_0000QK_0001 CGP 13:113208193-113323672
CIL_00058I CIL_00058I_0002 CGP 13:113297241-113364148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005764 IDA lysosome
GO:0005768 IEA endosome
GO:0005770 IDA late endosome
GO:0005771 IEA multivesicular body
GO:0005773 IEA vacuole
GO:0005887 TAS integral component of plasma membrane
GO:0006914 IEA autophagy
GO:0008626 IMP granzyme-mediated apoptotic signaling pathway
GO:0009897 IEA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0016020 IDA:IEA membrane
GO:0019899 IPI enzyme binding
GO:0019904 IEA protein domain specific binding
GO:0030425 IEA dendrite
GO:0031410 IEA cytoplasmic vesicle
GO:0031982 IEA vesicle
GO:0042383 IEA sarcolemma
GO:0042470 IEA melanosome
GO:0043025 IEA neuronal cell body
GO:0043323 IMP positive regulation of natural killer cell degranulation
GO:0044194 IEA cytolytic granule
GO:0045954 IMP positive regulation of natural killer cell mediated cytotoxicity
GO:0048102 IEA autophagic cell death
GO:0050821 ISS protein stabilization
GO:0061474 IEA phagolysosome membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0072594 IMP establishment of protein localization to organelle
GO:0090160 IMP Golgi to lysosome transport
GO:0097208 IEA alveolar lamellar body
GO:1902513 IMP regulation of organelle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077944 LAMP1 (1 of 2) lysosomal-associated membrane protein 1 protein_coding Danio_rerio
ENSDARG00000092610 lamp1 lysosomal-associated membrane protein 1 protein_coding Danio_rerio
ENSMUSG00000031447 Lamp1 lysosomal-associated membrane protein 1 protein_coding Mus_musculus

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