C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139842-ENSG00000185896 CGP 9606 13:113208193-113323672
GeneTranscriptPositionBiotype
ENSG00000139842 (CUL4A)
cullin 4A 		ENST00000326335 (CUL4A-201) 113208694-113265072 protein_coding
ENST00000375440 (CUL4A-002) 113209544-113263582 protein_coding
ENST00000375441 (CUL4A-202) 113208193-113265072 protein_coding
ENST00000451881 (CUL4A-203) 113208772-113265077 protein_coding
ENST00000463426 (CUL4A-004) 113209833-113230030 processed_transcript
ENST00000470067 (CUL4A-008) 113244223-113254775 processed_transcript
ENST00000472083 (CUL4A-009) 113245956-113263559 processed_transcript
ENST00000474116 (CUL4A-006) 113209616-113219812 processed_transcript
ENST00000488558 (CUL4A-007) 113209600-113230212 protein_coding
ENST00000494985 (CUL4A-003) 113209630-113228017 processed_transcript
ENST00000498562 (CUL4A-005) 113209883-113235145 processed_transcript
ENST00000617546 (CUL4A-001) 113208836-113267108 protein_coding
ENSG00000185896 (LAMP1)
lysosomal-associated membrane protein 1 		ENST00000332556 (LAMP1-001) 113297241-113323672 protein_coding
ENST00000471046 (LAMP1-002) 113321767-113322594 processed_transcript
ENST00000472564 (LAMP1-003) 113304932-113323430 retained_intron
ENSG00000232662 (LDHBP1)
lactate dehydrogenase B pseudogene 1 		ENST00000455730 (LDHBP1-001) 113276616-113277734 processed_pseudogene
ENSG00000275261 (AL136221.1)
 ENST00000622902 (AL136221.1-201) 113263092-113263171 miRNA
ENSG00000275403 (AL136221.2)
 ENST00000611623 (AL136221.2-201) 113263006-113263085 miRNA
ENSG00000277942 (MIR8075)
microRNA 8075 		ENST00000614354 (MIR8075-201) 113262920-113262999 miRNA
ENSG00000278639 (AL136221.3)
 ENST00000610632 (AL136221.3-201) 113262834-113262913 miRNA
CIL_0000QK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031446-ENSMUSG00000031447 CGP 10090 8:13105621-13175338
GeneTranscriptPositionBiotype
ENSMUSG00000031446 (Cul4a)
cullin 4A 		ENSMUST00000016680 (Cul4a-001) 13105621-13147940 protein_coding
ENSMUST00000121426 (Cul4a-002) 13105740-13124222 protein_coding
ENSMUST00000125514 (Cul4a-004) 13123525-13147362 nonsense_mediated_decay
ENSMUST00000125646 (Cul4a-006) 13144225-13147940 retained_intron
ENSMUST00000135371 (Cul4a-003) 13105740-13117195 retained_intron
ENSMUST00000139316 (Cul4a-008) 13139843-13142592 retained_intron
ENSMUST00000141315 (Cul4a-007) 13105936-13121746 retained_intron
ENSMUST00000142700 (Cul4a-005) 13140307-13146619 processed_transcript
ENSMUSG00000031447 (Lamp1)
lysosomal-associated membrane protein 1 		ENSMUST00000033824 (Lamp1-201) 13159135-13175338 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QK_0001ENSG00000139842ENST00000326335ENST00000375440ENST00000375441ENST00000451881ENST00000463426ENST00000470067ENST00000472083ENST00000474116ENST00000488558ENST00000494985ENST00000498562ENST00000617546ENSG00000185896ENST00000332556ENST00000471046ENST00000472564ENSG00000232662ENST00000455730ENSG00000275261ENST00000622902ENSG00000275403ENST00000611623ENSG00000277942ENST00000614354ENSG00000278639ENST00000610632CIL_0000QK_0002ENSMUSG00000031446ENSMUST00000016680ENSMUST00000121426ENSMUST00000125514ENSMUST00000125646ENSMUST00000135371ENSMUST00000139316ENSMUST00000141315ENSMUST00000142700ENSMUSG00000031447ENSMUST00000033824
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QK_0001ENSG00000139842ENST00000326335ENST00000375440ENST00000375441ENST00000451881ENST00000472083ENST00000498562ENSG00000185896ENST00000332556ENST00000472564ENSG00000232662ENST00000455730ENSG00000275261ENST00000622902ENSG00000275403ENST00000611623ENSG00000277942ENST00000614354ENSG00000278639ENST00000610632CIL_0000QK_0002ENSMUSG00000031446ENSMUST00000016680ENSMUST00000121426ENSMUST00000125514ENSMUST00000125646ENSMUST00000135371ENSMUSG00000031447ENSMUST00000033824
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139842 ENST00000326335 N/A N/A 2.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.619±0.00 N/A N/A
ENST00000375440 N/A N/A N/A 2.287±0.00 6.745±0.00 6.358±0.00 9.360±0.00 5.241±0.00 8.850±0.00 4.043±0.00 N/A N/A N/A N/A
ENST00000375441 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.357±0.00 N/A N/A N/A N/A
ENST00000451881 6.803±0.00 7.164±0.00 N/A 3.800±0.00 8.263±1.62 8.856±4.46 6.542±0.78 6.565±1.07 4.805±1.68 1.955±0.00 11.743±1.98 14.829±6.30 7.422±6.30 22.608±3.79
ENST00000463426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472083 N/A N/A 10.821±0.00 N/A N/A N/A N/A 17.393±0.00 N/A N/A N/A N/A N/A N/A
ENST00000474116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498562 N/A N/A 7.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185896 ENST00000332556 150.371±0.00 116.135±0.00 14.838±0.00 52.886±38.95 71.739±55.07 52.856±43.50 24.855±20.04 81.377±49.46 57.772±39.67 71.938±57.09 24.372±21.95 95.843±45.62 168.271±20.53 113.977±21.31
ENST00000471046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472564 N/A N/A N/A N/A 1.065±0.00 N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A N/A
ENSG00000232662 ENST00000455730 0.064±0.00 0.147±0.00 0.123±0.00 0.057±0.00 0.109±0.00 N/A 0.024±0.00 0.283±0.00 0.130±0.00 0.013±0.00 N/A 0.172±0.12 0.139±0.00 0.112±0.08
ENSG00000275261 ENST00000622902 N/A N/A N/A N/A 1.299±0.00 1.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275403 ENST00000611623 N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.754±0.00
ENSG00000277942 ENST00000614354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.994±0.00
ENSG00000278639 ENST00000610632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.285±0.00 N/A 2.410±1.58
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031446 ENSMUST00000016680 25.387±1.81 25.354±2.02 22.632±1.46 18.916±7.19 14.847±3.33 13.657±2.34 17.666±1.23 15.840±1.42 24.824±7.34 16.243±0.27 23.205±1.10 31.037±7.02 21.677±6.37 25.379±5.21
ENSMUST00000121426 N/A 43.463±6.66 N/A N/A 10.630±1.09 8.193±0.71 N/A N/A N/A N/A N/A 23.087±4.06 N/A N/A
ENSMUST00000125514 N/A N/A N/A 5.950±0.00 N/A 4.685±0.00 N/A N/A N/A N/A N/A 19.238±6.20 5.373±1.32 N/A
ENSMUST00000125646 N/A 52.763±6.17 N/A N/A 11.964±0.87 11.858±2.14 N/A 7.971±2.56 13.264±1.78 10.975±2.89 N/A N/A N/A N/A
ENSMUST00000135371 N/A N/A N/A N/A 4.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031447 ENSMUST00000033824 263.045±45.68 251.277±30.60 231.725±35.84 69.730±16.24 248.819±28.34 264.592±63.87 195.948±32.81 600.550±43.17 228.839±100.64 340.658±42.51 150.221±28.64 343.108±112.11 250.385±83.05 245.265±103.31

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