C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: reticulon 4 receptor-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185924 RTN4RL1 9606 - 17:1934677-2025345 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331238 RTN4RL1-001 1934677-2025345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331238 1.657±0.00 1.136±0.00 0.219±0.00 4.618±0.84 1.684±1.49 0.222±0.00 0.391±0.14 1.315±0.76 1.295±0.53 0.581±0.27 0.467±0.22 0.986±0.93 0.730±0.23 0.863±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0001 VISTA 17:1876478-2477942
CIL_0007RP CIL_0007RP_0001 VISTA 17:1878704-2480995

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IDA receptor activity
GO:0005515 IEA protein binding
GO:0009897 IEA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0031103 TAS axon regeneration
GO:0045121 IEA membrane raft
GO:0046658 IDA anchored component of plasma membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007856 rtn4rl1a reticulon 4 receptor-like 1a protein_coding Danio_rerio
ENSDARG00000055578 rtn4rl1b reticulon 4 receptor-like 1b protein_coding Danio_rerio
ENSMUSG00000045287 Rtn4rl1 reticulon 4 receptor-like 1 protein_coding Mus_musculus

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