C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulon 4 receptor-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331238 RTN4RL1-001 ENSG00000185924 9606 - 17:1934677-2025345 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331238 1.657±0.00 1.136±0.00 0.219±0.00 4.618±0.84 1.684±1.49 0.222±0.00 0.391±0.14 1.315±0.76 1.295±0.53 0.581±0.27 0.467±0.22 0.986±0.93 0.730±0.23 0.863±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0001 VISTA 17:1876478-2477942
CIL_0007RP CIL_0007RP_0001 VISTA 17:1878704-2480995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IDA receptor activity
GO:0005515 IEA protein binding
GO:0009897 IEA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0031103 TAS axon regeneration
GO:0045121 IEA membrane raft
GO:0046658 IDA anchored component of plasma membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102514 Rtn4rl1-001 protein_coding Mus_musculus 0 2078

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