C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: reticulon 4 receptor-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045287 Rtn4rl1 10090 + 11:75193783-75267769 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102514 Rtn4rl1-001 75193783-75267769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102514 9.894±5.50 28.719±5.54 13.791±1.32 4.642±4.46 6.715±2.28 3.652±0.34 3.401±0.13 5.432±0.43 1.802±1.83 6.300±0.62 0.339±0.12 8.913±2.37 0.946±0.80 1.199±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RP CIL_0007RP_0002 VISTA 11:74746156-75348336
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435
CIL_0007KQ CIL_0007KQ_0002 UCNEbase 11:75016990-75215448
CIL_00000P CIL_00000P_0002 CGP 11:75177643-75267769
CIL_00037G CIL_00037G_0002 CGP 11:75193783-75348324

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 ISS receptor activity
GO:0009897 IEA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0016021 IEA integral component of membrane
GO:0031103 TAS axon regeneration
GO:0045121 IEA membrane raft
GO:0046658 ISS anchored component of plasma membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007856 rtn4rl1a reticulon 4 receptor-like 1a protein_coding Danio_rerio
ENSDARG00000055578 rtn4rl1b reticulon 4 receptor-like 1b protein_coding Danio_rerio
ENSG00000185924 RTN4RL1 reticulon 4 receptor-like 1 protein_coding Homo_sapiens

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