C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 186, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185958 FAM186A 9606 - 12:50326230-50396622 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327337 FAM186A-002 50327312-50396484 protein_coding
  ENST00000539751 FAM186A-003 50327309-50334103 nonsense_mediated_decay
  ENST00000543096 FAM186A-201 50326230-50350885 protein_coding
  ENST00000543111 FAM186A-001 50326230-50396622 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327337ENST00000539751ENST00000543096ENST00000543111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327337 N/A N/A 0.035±0.00 0.010±0.00 0.009±0.00 N/A N/A N/A 0.012±0.00 N/A 0.019±0.00 N/A N/A N/A
ENST00000539751 N/A N/A N/A N/A 0.073±0.00 0.372±0.28 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543096 0.030±0.00 0.135±0.00 N/A 0.071±0.00 0.057±0.01 0.062±0.03 0.039±0.02 0.146±0.00 0.088±0.00 0.038±0.00 0.078±0.00 0.111±0.00 0.012±0.00 2.366±0.00
ENST00000543111 N/A 0.018±0.00 N/A 0.012±0.00 0.034±0.00 N/A 0.004±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_00051T CIL_00051T_0001 CGP 12:50175788-50396622
CIL_000058 CIL_000058_0001 CGP 12:50326230-50480004

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000045350 Fam186a family with sequence similarity 186, member A protein_coding Mus_musculus

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