C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysine (K)-specific demethylase 4D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186280 KDM4D 9606 + 11:94973681-94999518 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335080 KDM4D-001 94973681-94999518 protein_coding
  ENST00000536741 KDM4D-002 94973823-94999514 protein_coding
  ENST00000610872 KDM4D-201 94997173-94999363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335080ENST00000536741ENST00000610872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335080 0.108±0.00 0.260±0.00 N/A 0.320±0.00 0.120±0.00 N/A 0.103±0.05 0.209±0.00 N/A N/A N/A 0.312±0.17 0.233±0.05 21.391±1.75
ENST00000536741 0.028±0.00 N/A 0.039±0.00 0.375±0.00 0.048±0.00 0.019±0.00 N/A 0.114±0.00 0.062±0.00 N/A 0.122±0.00 N/A N/A N/A
ENST00000610872 0.171±0.00 0.298±0.00 N/A 0.344±0.00 0.201±0.00 0.021±0.00 0.125±0.07 N/A 0.107±0.02 0.121±0.07 0.088±0.00 0.246±0.00 0.109±0.01 9.093±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0032454 IDA histone demethylase activity (H3-K9 specific)
GO:0033169 IDA histone H3-K9 demethylation
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000053914 Kdm4d lysine (K)-specific demethylase 4D protein_coding Mus_musculus

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