C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysine (K)-specific demethylase 4D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053914 Kdm4d 10090 - 9:14462548-14500482 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058796 Kdm4d-001 14462548-14500482 protein_coding
  ENSMUST00000115647 Kdm4d-002 14463210-14500400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058796ENSMUST00000115647
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058796 0.081±0.03 0.207±0.09 0.027±0.00 0.151±0.14 0.173±0.04 0.081±0.02 0.010±0.00 0.069±0.05 0.018±0.01 0.080±0.04 0.022±0.00 0.245±0.10 0.022±0.01 21.508±6.93
ENSMUST00000115647 0.087±0.06 0.225±0.12 N/A N/A 0.144±0.01 0.048±0.00 0.040±0.02 0.043±0.01 0.010±0.01 0.041±0.02 0.030±0.01 0.220±0.12 0.033±0.02 1.809±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0032454 IEA histone demethylase activity (H3-K9 specific)
GO:0033169 IMP histone H3-K9 demethylation
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000186280 KDM4D lysine (K)-specific demethylase 4D protein_coding Homo_sapiens

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