C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NFKB repressing factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186416 NKRF 9606 - X:119588337-119605895 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304449 NKRF-002 119588337-119605895 protein_coding
  ENST00000371527 NKRF-001 119588337-119593150 protein_coding
  ENST00000487600 NKRF-003 119588343-119591309 processed_transcript
  ENST00000542113 NKRF-201 119588341-119605883 protein_coding
  ENST00000617452 NKRF-202 119588341-119593150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304449ENST00000371527ENST00000542113ENST00000617452
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304449 2.426±0.00 2.376±0.00 5.116±0.89 1.984±0.00 1.737±0.83 0.773±0.42 2.301±1.49 0.947±0.21 2.358±0.00 0.996±0.94 3.160±1.61 3.808±0.55 1.920±0.73
ENST00000371527 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 0.267±0.00 N/A N/A N/A N/A
ENST00000542113 N/A N/A 1.743±0.00 0.579±0.00 N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A
ENST00000617452 N/A 0.563±0.00 N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UR CIL_0001UR_0001 CGP X:119574538-119605895
CIL_0001U3 CIL_0001U3_0001 CGP X:119588337-119693370

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055040 nkrf NF-kappa B repressing factor protein_coding Danio_rerio
ENSMUSG00000044149 Nkrf NF-kappaB repressing factor protein_coding Mus_musculus

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