C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077721-ENSG00000186416 CGP 9606 X:119574538-119605895
GeneTranscriptPositionBiotype
ENSG00000077721 (UBE2A)
ubiquitin-conjugating enzyme E2A 		ENST00000346330 (UBE2A-002) 119574677-119583463 protein_coding
ENST00000371558 (UBE2A-001) 119574538-119584418 protein_coding
ENST00000371569 (UBE2A-003) 119580335-119584418 retained_intron
ENST00000469205 (UBE2A-004) 119574739-119575683 retained_intron
ENSG00000186416 (NKRF)
NFKB repressing factor 		ENST00000304449 (NKRF-002) 119588337-119605895 protein_coding
ENST00000371527 (NKRF-001) 119588337-119593150 protein_coding
ENST00000487600 (NKRF-003) 119588343-119591309 processed_transcript
ENST00000542113 (NKRF-201) 119588341-119605883 protein_coding
ENST00000617452 (NKRF-202) 119588341-119593150 protein_coding
CIL_0001UR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016308-ENSMUSG00000044149 CGP 10090 X:36874358-36902899
GeneTranscriptPositionBiotype
ENSMUSG00000016308 (Ube2a)
ubiquitin-conjugating enzyme E2A 		ENSMUST00000016452 (Ube2a-001) 36874358-36884215 protein_coding
ENSMUSG00000044149 (Nkrf)
NF-kappaB repressing factor 		ENSMUST00000057093 (Nkrf-001) 36887540-36902899 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UR_0001ENSG00000077721ENST00000346330ENST00000371558ENST00000371569ENST00000469205ENSG00000186416ENST00000304449ENST00000371527ENST00000487600ENST00000542113ENST00000617452CIL_0001UR_0002ENSMUSG00000016308ENSMUST00000016452ENSMUSG00000044149ENSMUST00000057093
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UR_0001ENSG00000077721ENST00000346330ENST00000371558ENST00000371569ENSG00000186416ENST00000304449ENST00000371527ENST00000542113ENST00000617452CIL_0001UR_0002ENSMUSG00000016308ENSMUST00000016452ENSMUSG00000044149ENSMUST00000057093
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077721 ENST00000346330 N/A N/A N/A N/A 3.448±0.00 4.484±0.00 3.632±0.00 N/A N/A 12.012±0.00 10.409±2.40 N/A N/A N/A
ENST00000371558 10.962±0.00 12.851±0.00 N/A 8.959±6.09 11.172±9.16 6.576±2.61 11.868±10.36 15.196±0.00 4.421±3.27 14.429±0.00 10.820±0.00 11.832±5.55 40.352±4.11 16.713±4.69
ENST00000371569 N/A 1.585±0.00 1.418±0.00 1.627±0.00 1.040±0.24 N/A 0.450±0.00 N/A N/A 3.561±0.00 1.111±0.00 1.664±0.59 N/A N/A
ENST00000469205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186416 ENST00000304449 2.426±0.00 2.376±0.00 N/A 5.116±0.89 1.984±0.00 1.737±0.83 0.773±0.42 2.301±1.49 0.947±0.21 2.358±0.00 0.996±0.94 3.160±1.61 3.808±0.55 1.920±0.73
ENST00000371527 N/A N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 0.267±0.00 N/A N/A N/A N/A
ENST00000487600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542113 N/A N/A N/A 1.743±0.00 0.579±0.00 N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A
ENST00000617452 N/A 0.563±0.00 N/A N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016308 ENSMUST00000016452 8.945±0.76 19.557±1.67 13.097±1.13 10.840±0.83 11.543±2.12 14.498±2.01 9.780±0.45 9.855±1.31 9.434±2.03 10.261±1.28 9.633±0.59 8.432±1.19 29.228±9.19 4.168±1.86
ENSMUSG00000044149 ENSMUST00000057093 0.960±0.43 0.376±0.18 1.676±0.02 5.318±1.55 0.592±0.14 0.510±0.31 0.510±0.03 0.471±0.15 1.094±0.84 0.752±0.16 0.585±0.05 0.901±0.73 1.034±0.44 0.428±0.02

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