C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001U3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186416-ENSG00000125354 CGP 9606 X:119588337-119693370
GeneTranscriptPositionBiotype
ENSG00000125354 (SEPT6)
septin 6 		ENST00000343984 (SEPT6-001) 119617639-119693370 protein_coding
ENST00000354228 (SEPT6-004) 119616712-119693370 protein_coding
ENST00000354416 (SEPT6-002) 119616945-119693370 protein_coding
ENST00000360156 (SEPT6-006) 119615724-119693370 protein_coding
ENST00000394610 (SEPT6-201) 119616948-119693370 protein_coding
ENST00000460411 (SEPT6-005) 119616712-119693370 nonsense_mediated_decay
ENST00000467310 (SEPT6-007) 119619309-119633424 processed_transcript
ENST00000481072 (SEPT6-008) 119628816-119633502 processed_transcript
ENST00000489216 (SEPT6-003) 119616716-119693370 protein_coding
ENSG00000186416 (NKRF)
NFKB repressing factor 		ENST00000304449 (NKRF-002) 119588337-119605895 protein_coding
ENST00000371527 (NKRF-001) 119588337-119593150 protein_coding
ENST00000487600 (NKRF-003) 119588343-119591309 processed_transcript
ENST00000542113 (NKRF-201) 119588341-119605883 protein_coding
ENST00000617452 (NKRF-202) 119588341-119593150 protein_coding
ENSG00000211578 (MIR766)
microRNA 766 		ENST00000390223 (MIR766-201) 119646743-119646854 miRNA
CIL_0001U3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044149-ENSMUSG00000050379 CGP 10090 X:36887540-36991794
GeneTranscriptPositionBiotype
ENSMUSG00000044149 (Nkrf)
NF-kappaB repressing factor 		ENSMUST00000057093 (Nkrf-001) 36887540-36902899 protein_coding
ENSMUSG00000050379 (Sept6)
septin 6 		ENSMUST00000053456 (Sept6-002) 36913446-36989656 protein_coding
ENSMUST00000060474 (Sept6-003) 36911326-36989656 protein_coding
ENSMUST00000115239 (Sept6-001) 36915031-36989656 protein_coding
ENSMUST00000128766 (Sept6-004) 36971902-36989491 retained_intron
ENSMUST00000152291 (Sept6-005) 36966596-36991794 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001U3_0001ENSG00000125354ENST00000343984ENST00000354228ENST00000354416ENST00000360156ENST00000394610ENST00000460411ENST00000467310ENST00000481072ENST00000489216ENSG00000186416ENST00000304449ENST00000371527ENST00000487600ENST00000542113ENST00000617452ENSG00000211578ENST00000390223CIL_0001U3_0002ENSMUSG00000044149ENSMUST00000057093ENSMUSG00000050379ENSMUST00000053456ENSMUST00000060474ENSMUST00000115239ENSMUST00000128766ENSMUST00000152291
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001U3_0001ENSG00000125354ENST00000343984ENST00000354228ENST00000354416ENST00000360156ENST00000394610ENST00000460411ENST00000467310ENST00000489216ENSG00000186416ENST00000304449ENST00000371527ENST00000542113ENST00000617452ENSG00000211578ENST00000390223CIL_0001U3_0002ENSMUSG00000044149ENSMUST00000057093ENSMUSG00000050379ENSMUST00000053456ENSMUST00000060474ENSMUST00000115239ENSMUST00000152291
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125354 ENST00000343984 1.187±0.00 N/A N/A N/A N/A N/A 0.642±0.28 1.825±1.07 1.246±0.00 0.916±0.00 0.256±0.16 0.289±0.00 2.347±0.00 N/A
ENST00000354228 N/A N/A 2.437±0.00 4.276±2.44 3.672±0.00 5.965±0.00 1.219±0.00 2.057±0.00 3.074±0.00 N/A N/A 3.610±1.33 9.459±5.51 20.123±0.00
ENST00000354416 N/A N/A N/A N/A 1.203±0.00 N/A N/A 0.234±0.00 0.453±0.07 1.582±0.00 N/A 0.911±0.11 1.309±0.00 N/A
ENST00000360156 2.032±0.00 6.922±0.00 N/A N/A 1.779±0.00 N/A N/A 1.356±0.95 1.134±0.05 3.557±0.00 N/A 1.531±0.10 2.249±0.62 8.085±0.74
ENST00000394610 N/A 7.821±0.00 N/A N/A 1.146±0.00 1.785±0.00 N/A 0.556±0.32 N/A N/A N/A 0.908±0.22 1.624±0.00 N/A
ENST00000460411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.704±0.00 N/A N/A N/A
ENST00000467310 N/A N/A N/A N/A N/A N/A 1.324±0.00 5.343±0.00 3.318±0.00 9.528±0.00 0.235±0.00 N/A 6.729±0.89 N/A
ENST00000481072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489216 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.628±0.08 N/A N/A 3.972±0.00 N/A
ENSG00000186416 ENST00000304449 2.426±0.00 2.376±0.00 N/A 5.116±0.89 1.984±0.00 1.737±0.83 0.773±0.42 2.301±1.49 0.947±0.21 2.358±0.00 0.996±0.94 3.160±1.61 3.808±0.55 1.920±0.73
ENST00000371527 N/A N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 0.267±0.00 N/A N/A N/A N/A
ENST00000487600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542113 N/A N/A N/A 1.743±0.00 0.579±0.00 N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A
ENST00000617452 N/A 0.563±0.00 N/A N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A N/A N/A N/A
ENSG00000211578 ENST00000390223 N/A N/A N/A N/A N/A 16.083±0.00 N/A N/A N/A N/A N/A N/A N/A 0.597±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044149 ENSMUST00000057093 0.960±0.43 0.376±0.18 1.676±0.02 5.318±1.55 0.592±0.14 0.510±0.31 0.510±0.03 0.471±0.15 1.094±0.84 0.752±0.16 0.585±0.05 0.901±0.73 1.034±0.44 0.428±0.02
ENSMUSG00000050379 ENSMUST00000053456 1.697±0.69 1.185±0.22 1.791±0.71 2.495±0.30 6.271±1.88 1.494±0.27 0.589±0.33 0.631±0.38 0.984±0.80 1.446±0.64 0.145±0.04 1.616±0.57 3.379±1.66 2.731±0.80
ENSMUST00000060474 0.577±0.03 N/A 0.860±0.00 11.995±0.33 N/A 0.564±0.00 0.305±0.03 0.269±0.01 0.356±0.00 0.560±0.00 0.107±0.03 0.711±0.27 1.661±0.55 N/A
ENSMUST00000115239 1.797±0.29 1.231±0.56 2.561±0.00 16.839±11.86 N/A 1.611±0.26 0.909±0.19 0.792±0.30 1.341±0.75 1.638±0.30 0.273±0.15 4.769±3.71 11.991±11.86 4.370±0.68
ENSMUST00000128766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152291 5.155±1.03 8.546±1.56 N/A N/A 25.055±4.01 8.017±1.04 N/A 2.378±0.94 0.708±0.22 4.695±1.01 N/A 8.145±1.70 N/A N/A

Loading