C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gliomedin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186417 GLDN 9606 + 15:51341629-51408013 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335449 GLDN-001 51341629-51408013 protein_coding
  ENST00000396399 GLDN-002 51377258-51408005 protein_coding
  ENST00000464150 GLDN-003 51377258-51385552 retained_intron
  ENST00000558286 GLDN-004 51341874-51384634 retained_intron
  ENST00000558426 GLDN-008 51377352-51400211 protein_coding
  ENST00000559317 GLDN-009 51360254-51384414 retained_intron
  ENST00000560215 GLDN-006 51341798-51385552 protein_coding
  ENST00000560690 GLDN-005 51341946-51384633 retained_intron
  ENST00000561194 GLDN-007 51377348-51384222 retained_intron
  ENST00000612989 GLDN-201 51377456-51405244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000335449ENST00000396399ENST00000464150ENST00000558426ENST00000560215ENST00000612989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000335449 6.289±0.00 N/A N/A 9.430±4.92 2.415±0.00 N/A 1.541±0.00 0.260±0.00 0.239±0.00 1.357±0.15 0.082±0.00 1.352±0.00 0.021±0.00
ENST00000396399 2.363±0.00 0.885±0.00 N/A 4.822±1.38 1.359±0.00 0.260±0.00 0.344±0.00 0.011±0.00 0.779±0.00 2.012±0.00 1.011±0.98 1.712±0.19 0.791±0.00
ENST00000464150 N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A
ENST00000558426 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560215 N/A N/A N/A N/A N/A 0.209±0.00 1.006±0.00 N/A N/A 1.137±0.00 0.095±0.00 N/A N/A
ENST00000612989 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YR CIL_0007YR_0001 VISTA 15:51100773-51703779
CIL_000507 CIL_000507_0002 CGP 15:51208057-51408013
CIL_000506 CIL_000506_0002 CGP 15:51341629-51622833

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005581 IEA collagen trimer
GO:0005615 IEA extracellular space
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032528 IEA microvillus organization
GO:0034113 IEA heterotypic cell-cell adhesion
GO:0045162 IEA clustering of voltage-gated sodium channels
GO:0086080 IEA protein binding involved in heterotypic cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061576 colm collomin protein_coding Danio_rerio
ENSMUSG00000046167 Gldn gliomedin protein_coding Mus_musculus

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