C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gliomedin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335449 GLDN-001 ENSG00000186417 9606 + 15:51341629-51408013 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000335449
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000335449 6.289±0.00 9.430±4.92 2.415±0.00 1.541±0.00 0.260±0.00 0.239±0.00 1.357±0.15 0.082±0.00 1.352±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YR CIL_0007YR_0001 VISTA 15:51100773-51703779
CIL_000507 CIL_000507_0002 CGP 15:51208057-51408013
CIL_000506 CIL_000506_0002 CGP 15:51341629-51622833

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005581 IEA collagen trimer
GO:0005615 IEA extracellular space
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032528 IEA microvillus organization
GO:0034113 IEA heterotypic cell-cell adhesion
GO:0045162 IEA clustering of voltage-gated sodium channels
GO:0086080 IEA protein binding involved in heterotypic cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056740 Gldn-001 protein_coding Mus_musculus 0 1735
ENSDART00000104029 fam132a-001 protein_coding Danio_rerio 0.000002 60

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