C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000506_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061576-ENSDARG00000091293 CGP 7955 18:38086949-38139616
GeneTranscriptPositionBiotype
ENSDARG00000061576 (colm)
collomin 		ENSDART00000087960 (colm-201) 38087114-38099463 protein_coding
ENSDART00000149859 (colm-001) 38086949-38099659 protein_coding
ENSDARG00000091293 (dmxl2)
Dmx-like 2 		ENSDART00000129387 (dmxl2-201) 38107943-38134499 protein_coding
ENSDART00000148383 (dmxl2-002) 38129348-38134142 protein_coding
ENSDART00000149158 (dmxl2-001) 38106544-38139616 protein_coding
ENSDART00000149890 (dmxl2-003) 38108045-38114495 retained_intron
CIL_000506_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186417-ENSG00000104093 CGP 9606 15:51341629-51622833
GeneTranscriptPositionBiotype
ENSG00000104093 (DMXL2)
Dmx-like 2 		ENST00000251076 (DMXL2-001) 51447711-51622833 protein_coding
ENST00000449909 (DMXL2-003) 51448812-51622635 protein_coding
ENST00000543779 (DMXL2-014) 51447788-51622635 protein_coding
ENST00000558124 (DMXL2-009) 51456325-51459782 processed_transcript
ENST00000558507 (DMXL2-002) 51567043-51622770 retained_intron
ENST00000559059 (DMXL2-013) 51450195-51455213 protein_coding
ENST00000559062 (DMXL2-011) 51456313-51458878 retained_intron
ENST00000559498 (DMXL2-007) 51457447-51471350 nonsense_mediated_decay
ENST00000559769 (DMXL2-005) 51447791-51450673 retained_intron
ENST00000559868 (DMXL2-012) 51453248-51456318 retained_intron
ENST00000560211 (DMXL2-010) 51457372-51459190 retained_intron
ENST00000560421 (DMXL2-006) 51547332-51603701 processed_transcript
ENST00000560891 (DMXL2-004) 51447776-51481479 protein_coding
ENST00000561079 (DMXL2-008) 51463076-51471236 retained_intron
ENSG00000186417 (GLDN)
gliomedin 		ENST00000335449 (GLDN-001) 51341629-51408013 protein_coding
ENST00000396399 (GLDN-002) 51377258-51408005 protein_coding
ENST00000464150 (GLDN-003) 51377258-51385552 retained_intron
ENST00000558286 (GLDN-004) 51341874-51384634 retained_intron
ENST00000558426 (GLDN-008) 51377352-51400211 protein_coding
ENST00000559317 (GLDN-009) 51360254-51384414 retained_intron
ENST00000560215 (GLDN-006) 51341798-51385552 protein_coding
ENST00000560690 (GLDN-005) 51341946-51384633 retained_intron
ENST00000561194 (GLDN-007) 51377348-51384222 retained_intron
ENST00000612989 (GLDN-201) 51377456-51405244 protein_coding
ENSG00000259194 (RP11-108K3.4)
 ENST00000558785 (RP11-108K3.4-001) 51367377-51369110 sense_intronic
ENSG00000263437 (AC020892.1)
 ENST00000583261 (AC020892.1-201) 51609697-51609766 miRNA
ENSG00000270378 (RP11-108K3.5)
 ENST00000605745 (RP11-108K3.5-001) 51351100-51351192 processed_pseudogene
CIL_000506_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046167-ENSMUSG00000041268 CGP 10090 9:54286486-54501760
GeneTranscriptPositionBiotype
ENSMUSG00000041268 (Dmxl2)
Dmx-like 2 		ENSMUST00000118163 (Dmxl2-004) 54365158-54501626 protein_coding
ENSMUST00000118600 (Dmxl2-001) 54366111-54501496 protein_coding
ENSMUST00000123709 (Dmxl2-007) 54365260-54445420 protein_coding
ENSMUST00000127880 (Dmxl2-003) 54415645-54474183 protein_coding
ENSMUST00000128865 (Dmxl2-009) 54445331-54447001 processed_transcript
ENSMUST00000131452 (Dmxl2-006) 54473870-54501760 nonsense_mediated_decay
ENSMUST00000144736 (Dmxl2-008) 54423173-54501571 retained_intron
ENSMUST00000149709 (Dmxl2-002) 54472696-54501626 retained_intron
ENSMUST00000154092 (Dmxl2-005) 54365164-54381893 retained_intron
ENSMUSG00000046167 (Gldn)
gliomedin 		ENSMUST00000056740 (Gldn-001) 54286486-54341786 protein_coding
ENSMUSG00000074343 (Gldnos)
gliomedin, opposite strand 		ENSMUST00000149237 (Gldnos-001) 54268578-54301570 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000506_0001ENSDARG00000061576ENSDART00000087960ENSDART00000149859ENSDARG00000091293ENSDART00000129387ENSDART00000148383ENSDART00000149158ENSDART00000149890CIL_000506_0002ENSG00000104093ENST00000251076ENST00000449909ENST00000543779ENST00000558124ENST00000558507ENST00000559059ENST00000559062ENST00000559498ENST00000559769ENST00000559868ENST00000560211ENST00000560421ENST00000560891ENST00000561079ENSG00000186417ENST00000335449ENST00000396399ENST00000464150ENST00000558286ENST00000558426ENST00000559317ENST00000560215ENST00000560690ENST00000561194ENST00000612989ENSG00000259194ENST00000558785ENSG00000263437ENST00000583261ENSG00000270378ENST00000605745CIL_000506_0003ENSMUSG00000041268ENSMUST00000118163ENSMUST00000118600ENSMUST00000123709ENSMUST00000127880ENSMUST00000128865ENSMUST00000131452ENSMUST00000144736ENSMUST00000149709ENSMUST00000154092ENSMUSG00000046167ENSMUST00000056740ENSMUSG00000074343ENSMUST00000149237
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000506_0001ENSDARG00000061576ENSDART00000087960ENSDART00000149859ENSDARG00000091293ENSDART00000129387ENSDART00000149158CIL_000506_0002ENSG00000104093ENST00000251076ENST00000449909ENST00000543779ENST00000559769ENST00000560891ENSG00000186417ENST00000335449ENST00000396399ENST00000464150ENST00000558426ENST00000560215ENST00000612989ENSG00000259194ENST00000558785ENSG00000263437ENST00000583261ENSG00000270378ENST00000605745CIL_000506_0003ENSMUSG00000041268ENSMUST00000118163ENSMUST00000118600ENSMUST00000123709ENSMUST00000127880ENSMUST00000131452ENSMUST00000154092ENSMUSG00000046167ENSMUST00000056740ENSMUSG00000074343ENSMUST00000149237
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061576 ENSDART00000087960 N/A N/A N/A 0.270±0.00 N/A N/A 0.025±0.00 0.167±0.00 0.021±0.00 N/A N/A N/A N/A N/A
ENSDART00000149859 N/A N/A N/A 0.202±0.00 N/A N/A 0.049±0.00 0.062±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000091293 ENSDART00000129387 N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A
ENSDART00000148383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149158 N/A N/A N/A 24.564±27.97 N/A N/A 0.101±0.00 0.147±0.03 0.121±0.00 N/A 3.677±0.00 N/A N/A N/A
ENSDART00000149890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104093 ENST00000251076 N/A N/A N/A 1.415±0.00 0.212±0.00 N/A N/A N/A N/A 1.756±0.00 N/A 0.312±0.00 0.442±0.00 N/A
ENST00000449909 N/A N/A N/A N/A 1.694±0.00 N/A N/A N/A N/A 3.681±0.00 0.257±0.00 N/A N/A N/A
ENST00000543779 0.307±0.00 0.147±0.00 2.766±0.00 2.448±0.00 0.475±0.28 3.221±0.00 0.419±0.01 0.304±0.00 0.246±0.00 N/A N/A N/A N/A 1.364±0.00
ENST00000558124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559769 0.640±0.00 0.799±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 1.434±0.42 N/A N/A
ENST00000559868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560891 0.659±0.00 0.606±0.00 N/A 6.381±1.46 0.867±0.00 0.598±0.00 0.442±0.00 1.353±0.00 1.354±0.00 2.193±1.17 N/A 1.826±1.06 0.766±0.31 3.638±0.15
ENST00000561079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186417 ENST00000335449 6.289±0.00 N/A N/A 9.430±4.92 2.415±0.00 N/A 1.541±0.00 0.260±0.00 0.239±0.00 1.357±0.15 N/A 0.082±0.00 1.352±0.00 0.021±0.00
ENST00000396399 2.363±0.00 0.885±0.00 N/A 4.822±1.38 1.359±0.00 0.260±0.00 0.344±0.00 0.011±0.00 0.779±0.00 2.012±0.00 N/A 1.011±0.98 1.712±0.19 0.791±0.00
ENST00000464150 N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558426 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560215 N/A N/A N/A N/A N/A 0.209±0.00 1.006±0.00 N/A N/A 1.137±0.00 N/A 0.095±0.00 N/A N/A
ENST00000560690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612989 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A
ENSG00000259194 ENST00000558785 N/A 0.311±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263437 ENST00000583261 0.494±0.00 3.026±0.00 N/A 1.100±0.00 0.520±0.00 N/A 0.962±0.00 5.524±0.00 1.858±0.00 0.492±0.00 4.243±0.00 N/A N/A 2.812±0.00
ENSG00000270378 ENST00000605745 N/A N/A N/A 0.248±0.00 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041268 ENSMUST00000118163 1.517±0.32 0.603±0.32 0.400±0.04 2.356±0.08 0.603±0.25 0.241±0.02 1.150±0.22 1.793±0.41 0.537±0.28 1.931±0.23 0.164±0.07 1.151±0.81 3.478±1.96 2.530±0.61
ENSMUST00000118600 N/A 0.179±0.00 N/A 5.803±4.23 0.464±0.03 N/A N/A 0.698±0.00 0.315±0.08 0.423±0.00 N/A 0.531±0.20 N/A 0.868±0.00
ENSMUST00000123709 0.677±0.16 0.497±0.21 0.494±0.04 3.716±0.53 0.322±0.07 0.319±0.08 0.492±0.07 0.847±0.14 0.328±0.20 0.544±0.00 0.076±0.04 0.888±0.38 0.583±0.00 N/A
ENSMUST00000127880 N/A N/A N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A 1.035±0.00 N/A N/A
ENSMUST00000128865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131452 N/A 1.930±0.72 N/A N/A 1.376±0.33 0.554±0.05 N/A N/A N/A N/A N/A 1.780±0.81 N/A N/A
ENSMUST00000144736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154092 1.772±0.13 0.708±0.09 1.684±0.08 8.789±1.76 0.766±0.13 0.288±0.09 1.196±0.29 2.252±0.60 1.323±0.61 2.488±0.22 0.298±0.12 1.306±0.85 3.042±0.51 2.059±0.00
ENSMUSG00000046167 ENSMUST00000056740 0.091±0.00 1.355±0.13 0.054±0.02 0.088±0.02 0.371±0.21 0.048±0.02 0.127±0.06 0.067±0.03 0.009±0.01 0.143±0.07 0.176±0.04 1.359±0.72 0.005±0.00 0.106±0.08
ENSMUSG00000074343 ENSMUST00000149237 N/A N/A N/A N/A N/A N/A 0.045±0.00 0.049±0.00 N/A N/A N/A N/A N/A 16.433±1.75

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