C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome P450, family 4, subfamily F, polypeptide 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186529 CYP4F3 9606 + 19:15615617-15662825 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221307 CYP4F3-001 15640900-15662825 protein_coding
  ENST00000585846 CYP4F3-005 15641309-15659771 protein_coding
  ENST00000586182 CYP4F3-004 15640897-15660126 protein_coding
  ENST00000587360 CYP4F3-006 15641294-15649216 nonsense_mediated_decay
  ENST00000588886 CYP4F3-008 15660489-15661293 processed_transcript
  ENST00000591058 CYP4F3-002 15640900-15660758 protein_coding
  ENST00000592279 CYP4F3-003 15640897-15659759 retained_intron
  ENST00000592424 CYP4F3-007 15649980-15658316 nonsense_mediated_decay
  ENST00000609670 CYP4F3-009 15645755-15647279 retained_intron
  ENST00000620621 CYP4F3-201 15615617-15659394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000221307ENST00000585846ENST00000586182ENST00000587360ENST00000588886ENST00000591058ENST00000592279ENST00000620621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000221307 0.275±0.00 0.050±0.00 N/A N/A 0.061±0.00 N/A 0.019±0.01 N/A N/A N/A 0.048±0.00 0.036±0.01 0.061±0.00
ENST00000585846 N/A N/A 2.203±0.00 N/A N/A N/A N/A 16.851±0.00 N/A N/A N/A N/A N/A
ENST00000586182 N/A N/A N/A 0.114±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.611±0.00 N/A N/A
ENST00000588886 1.469±0.00 3.126±0.00 N/A 3.235±0.00 2.673±0.00 1.012±0.00 0.351±0.00 N/A N/A 0.804±0.00 N/A N/A 2.088±0.00
ENST00000591058 N/A N/A N/A N/A N/A 0.692±0.00 N/A 9.668±0.00 N/A N/A 0.420±0.00 N/A N/A
ENST00000592279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A
ENST00000620621 N/A N/A N/A N/A N/A N/A N/A N/A 1.025±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019Y CIL_00019Y_0001 CGP 19:15508493-15630638

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004497 TAS monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006690 TAS icosanoid metabolic process
GO:0006691 TAS leukotriene metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019369 TAS arachidonic acid metabolic process
GO:0020037 IEA heme binding
GO:0036101 IEA leukotriene B4 catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050051 IEA leukotriene-B4 20-monooxygenase activity
GO:0052871 IEA alpha-tocopherol omega-hydroxylase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000003484 Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 protein_coding Mus_musculus

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