C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 397
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186812 ZNF397 9606 + 18:35241030-35267133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261333 ZNF397-005 35241055-35258394 protein_coding
  ENST00000330501 ZNF397-001 35241037-35249803 protein_coding
  ENST00000355632 ZNF397-004 35241055-35259227 protein_coding
  ENST00000585800 ZNF397-006 35241057-35244069 protein_coding
  ENST00000588119 ZNF397-009 35242473-35243284 protein_coding
  ENST00000589420 ZNF397-003 35241051-35267133 processed_transcript
  ENST00000589630 ZNF397-007 35241030-35243000 retained_intron
  ENST00000590470 ZNF397-010 35242795-35243238 processed_transcript
  ENST00000591206 ZNF397-002 35241037-35244100 protein_coding
  ENST00000591505 ZNF397-011 35254197-35258279 retained_intron
  ENST00000592264 ZNF397-008 35242390-35258394 protein_coding
  ENST00000601719 ZNF397-012 35241036-35242886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330501ENST00000591206
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330501 2.156±0.00 2.179±0.00 1.115±0.23 2.597±0.15 1.950±0.00 2.271±1.48 2.111±0.82 2.613±1.07 1.819±0.00 2.800±1.08 1.145±0.15 4.782±0.74
ENST00000591206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.716±1.15 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064X CIL_00064X_0001 CGP 18:34976928-35267133
CIL_0005Q1 CIL_0005Q1_0001 CGP 18:35241030-35290245

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024276 Zfp397 zinc finger protein 397 protein_coding Mus_musculus

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