C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00064X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166974-ENSG00000186812 CGP 9606 18:34976928-35267133
GeneTranscriptPositionBiotype
ENSG00000166974 (MAPRE2)
microtubule-associated protein, RP/EB family, member 2 		ENST00000300249 (MAPRE2-001) 35041360-35143470 protein_coding
ENST00000413393 (MAPRE2-201) 34976928-35143466 protein_coding
ENST00000436190 (MAPRE2-002) 34978244-35143470 protein_coding
ENST00000538170 (MAPRE2-003) 35041404-35143470 protein_coding
ENST00000585592 (MAPRE2-009) 35041490-35070644 retained_intron
ENST00000587359 (MAPRE2-008) 34977055-35097558 protein_coding
ENST00000588085 (MAPRE2-011) 35131918-35140497 retained_intron
ENST00000588349 (MAPRE2-012) 34978426-35102059 protein_coding
ENST00000588910 (MAPRE2-004) 35041431-35127617 protein_coding
ENST00000589180 (MAPRE2-010) 34977051-35127022 protein_coding
ENST00000589699 (MAPRE2-005) 35041650-35143470 protein_coding
ENST00000590793 (MAPRE2-007) 34977055-34988839 processed_transcript
ENST00000591734 (MAPRE2-006) 34976928-35127048 protein_coding
ENSG00000186814 (ZSCAN30)
zinc finger and SCAN domain containing 30 		ENST00000333206 (ZSCAN30-002) 35251066-35290208 protein_coding
ENST00000420878 (ZSCAN30-001) 35251068-35290232 protein_coding
ENST00000588448 (ZSCAN30-009) 35263296-35264046 protein_coding
ENST00000588832 (ZSCAN30-005) 35289345-35290232 processed_transcript
ENST00000589178 (ZSCAN30-003) 35260643-35290197 protein_coding
ENST00000590777 (ZSCAN30-012) 35252594-35254621 retained_intron
ENST00000592211 (ZSCAN30-004) 35264210-35290229 protein_coding
ENST00000592278 (ZSCAN30-006) 35263585-35290221 protein_coding
ENST00000592598 (ZSCAN30-008) 35264146-35267948 protein_coding
ENST00000601405 (ZSCAN30-013) 35263296-35264384 protein_coding
ENST00000610712 (ZSCAN30-201) 35251058-35290245 protein_coding
ENSG00000274400 (RP11-294N21.3)
 ENST00000619893 (RP11-294N21.3-001) 35144942-35145417 lincRNA
ENSG00000279989 (RP11-158H5.2)
 ENST00000624194 (RP11-158H5.2-001) 35257040-35257512 TEC

Homo sapiens Ensembl (GRCh38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_00064X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024277-ENSMUSG00000024276 CGP 10090 18:23752333-23964671
GeneTranscriptPositionBiotype
ENSMUSG00000024276 (Zfp397)
zinc finger protein 397 		ENSMUST00000060762 (Zfp397-201) 23954688-23964671 protein_coding
ENSMUSG00000024277 (Mapre2)
microtubule-associated protein, RP/EB family, member 2 		ENSMUST00000025127 (Mapre2-001) 23803984-23893857 protein_coding
ENSMUST00000115830 (Mapre2-006) 23753725-23892364 protein_coding
ENSMUST00000118826 (Mapre2-002) 23752393-23860637 protein_coding
ENSMUST00000132286 (Mapre2-003) 23752333-23774684 retained_intron
ENSMUST00000141853 (Mapre2-005) 23804020-23833793 retained_intron
ENSMUST00000149943 (Mapre2-007) 23753748-23797997 processed_transcript
ENSMUST00000155708 (Mapre2-004) 23752339-23883696 protein_coding
ENSMUST00000165387 (Mapre2-008) 23804103-23890931 nonsense_mediated_decay
ENSMUST00000170802 (Mapre2-201) 23752333-23893861 protein_coding
ENSMUSG00000089290 (Gm23207)
predicted gene, 23207 		ENSMUST00000158665 (Gm23207-201) 23817270-23817371 snRNA
ENSMUSG00000098607 (Mir6360)
microRNA 6360 		ENSMUST00000184278 (Mir6360-201) 23774864-23774989 miRNA

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064X_0001ENSG00000166974ENST00000300249ENST00000413393ENST00000436190ENST00000538170ENST00000585592ENST00000587359ENST00000588085ENST00000588349ENST00000588910ENST00000589180ENST00000589699ENST00000590793ENST00000591734ENSG00000186814ENST00000333206ENST00000420878ENST00000588448ENST00000588832ENST00000589178ENST00000590777ENST00000592211ENST00000592278ENST00000592598ENST00000601405ENST00000610712ENSG00000274400ENST00000619893ENSG00000279989ENST00000624194CIL_00064X_0002ENSMUSG00000024276ENSMUST00000060762ENSMUSG00000024277ENSMUST00000025127ENSMUST00000115830ENSMUST00000118826ENSMUST00000132286ENSMUST00000141853ENSMUST00000149943ENSMUST00000155708ENSMUST00000165387ENSMUST00000170802ENSMUSG00000089290ENSMUST00000158665ENSMUSG00000098607ENSMUST00000184278
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064X_0001ENSG00000166974ENST00000300249ENST00000413393ENST00000436190ENST00000538170ENST00000588085ENST00000589699ENSG00000186814ENST00000333206ENST00000589178ENST00000610712ENSG00000274400ENST00000619893ENSG00000279989ENST00000624194CIL_00064X_0002ENSMUSG00000024276ENSMUST00000060762ENSMUSG00000024277ENSMUST00000025127ENSMUST00000115830ENSMUST00000165387ENSMUST00000170802ENSMUSG00000089290ENSMUST00000158665ENSMUSG00000098607ENSMUST00000184278
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166974 ENST00000300249 6.541±0.00 8.255±0.00 2.722±0.00 29.270±0.00 4.469±1.64 7.187±3.93 20.254±13.00 4.311±1.49 3.173±1.53 9.239±3.13 2.636±1.30 5.437±4.34 10.424±4.92 5.074±4.20
ENST00000413393 N/A N/A N/A N/A 0.599±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00
ENST00000436190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.431±0.10 N/A N/A
ENST00000538170 N/A 3.725±0.00 N/A 12.080±0.00 N/A N/A N/A 1.960±0.42 2.709±0.00 N/A 3.079±0.16 2.330±0.00 2.900±0.00 0.261±0.00
ENST00000585592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.192±0.00 6.177±0.00 2.053±0.00
ENST00000588349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00
ENST00000590793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186814 ENST00000333206 N/A N/A N/A N/A N/A N/A N/A 1.203±0.00 N/A 1.082±0.00 N/A N/A 0.950±0.41 N/A
ENST00000420878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589178 1.502±0.00 2.724±0.00 N/A 1.768±0.39 N/A 1.428±0.00 1.705±0.47 N/A 0.930±0.00 N/A 0.844±0.00 N/A N/A N/A
ENST00000590777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610712 1.906±0.00 3.644±0.00 N/A 2.459±0.00 3.160±0.00 2.746±1.00 N/A 3.594±0.00 0.721±0.00 N/A N/A 4.256±0.02 N/A 4.121±0.58
ENSG00000274400 ENST00000619893 N/A N/A N/A 0.844±0.52 N/A 0.078±0.00 0.021±0.00 N/A N/A 0.089±0.00 N/A 0.100±0.00 0.094±0.00 0.021±0.00
ENSG00000279989 ENST00000624194 0.522±0.00 0.844±0.00 0.550±0.00 1.026±0.00 0.755±0.63 1.711±1.24 0.748±0.10 1.594±1.27 0.177±0.10 2.231±1.98 0.264±0.00 1.344±1.09 0.208±0.05 0.620±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024276 ENSMUST00000060762 2.367±0.87 1.266±0.24 7.064±1.00 5.124±2.29 1.698±0.66 1.616±0.24 1.202±0.10 1.567±0.73 2.729±1.94 1.442±0.14 1.956±0.75 2.587±1.33 2.922±0.97 2.002±0.39
ENSMUSG00000024277 ENSMUST00000025127 11.077±0.78 13.590±2.66 20.074±0.30 35.428±15.35 8.189±2.82 14.339±1.69 8.355±1.11 9.711±1.05 3.464±1.19 22.633±2.50 3.675±0.88 11.732±3.94 6.356±3.13 1.681±0.77
ENSMUST00000115830 7.904±3.16 4.563±0.82 12.141±0.00 12.176±0.00 12.310±2.87 15.926±3.85 19.846±3.94 10.501±1.82 4.630±2.50 6.827±1.15 6.508±0.76 5.928±2.36 16.224±10.20 1.025±0.60
ENSMUST00000118826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165387 N/A N/A N/A 60.358±0.00 N/A N/A N/A N/A N/A N/A N/A 13.631±0.00 24.686±0.70 4.272±0.00
ENSMUST00000170802 N/A N/A N/A N/A 3.551±0.00 N/A N/A 1.970±0.09 N/A N/A N/A N/A N/A N/A
ENSMUSG00000089290 ENSMUST00000158665 N/A N/A N/A 23.621±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098607 ENSMUST00000184278 N/A N/A N/A N/A 1704.392±578.31 2774.425±1019.43 1516.814±716.93 1674.491±1000.62 N/A 606.008±0.00 N/A 2570.655±273.04 N/A N/A

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