C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186814 ZSCAN30 9606 - 18:35251058-35290245 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333206 ZSCAN30-002 35251066-35290208 protein_coding
  ENST00000420878 ZSCAN30-001 35251068-35290232 protein_coding
  ENST00000588448 ZSCAN30-009 35263296-35264046 protein_coding
  ENST00000588832 ZSCAN30-005 35289345-35290232 processed_transcript
  ENST00000589178 ZSCAN30-003 35260643-35290197 protein_coding
  ENST00000590777 ZSCAN30-012 35252594-35254621 retained_intron
  ENST00000592211 ZSCAN30-004 35264210-35290229 protein_coding
  ENST00000592278 ZSCAN30-006 35263585-35290221 protein_coding
  ENST00000592598 ZSCAN30-008 35264146-35267948 protein_coding
  ENST00000601405 ZSCAN30-013 35263296-35264384 protein_coding
  ENST00000610712 ZSCAN30-201 35251058-35290245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333206ENST00000589178ENST00000610712
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333206 N/A N/A N/A N/A N/A N/A 1.203±0.00 N/A 1.082±0.00 N/A N/A 0.950±0.41 N/A
ENST00000589178 1.502±0.00 2.724±0.00 1.768±0.39 N/A 1.428±0.00 1.705±0.47 N/A 0.930±0.00 N/A 0.844±0.00 N/A N/A N/A
ENST00000610712 1.906±0.00 3.644±0.00 2.459±0.00 3.160±0.00 2.746±1.00 N/A 3.594±0.00 0.721±0.00 N/A N/A 4.256±0.02 N/A 4.121±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064X CIL_00064X_0001 CGP 18:34976928-35267133
CIL_0005Q1 CIL_0005Q1_0001 CGP 18:35241030-35290245

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024274 Zscan30 zinc finger and SCAN domain containing 30 protein_coding Mus_musculus

Loading