C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610712 ZSCAN30-201 ENSG00000186814 9606 - 18:35251058-35290245 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryTestisENST00000610712
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Testis
ENST00000610712 1.906±0.00 3.644±0.00 2.459±0.00 3.160±0.00 2.746±1.00 3.594±0.00 0.721±0.00 4.256±0.02 4.121±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064X CIL_00064X_0001 CGP 18:34976928-35267133
CIL_0005Q1 CIL_0005Q1_0001 CGP 18:35241030-35290245

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 1e-36 159
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 1e-31 143
ENSMUST00000088811 Zfp160-201 protein_coding Mus_musculus 4e-27 128
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 1e-21 110
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 1e-21 110
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 1e-21 110
ENSMUST00000058804 Zfp612-201 protein_coding Mus_musculus 2e-20 106
ENSMUST00000058104 Zfp719-001 protein_coding Mus_musculus 4e-17 95
ENSMUST00000105314 AU041133-201 protein_coding Mus_musculus 5e-16 92
ENSMUST00000165956 D3Ertd254e-201 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000184310 2010315B03Rik-003 protein_coding Mus_musculus 0.00000000000008 84
ENSMUST00000184117 2010315B03Rik-001 protein_coding Mus_musculus 0.00000000000008 84
ENSMUST00000071300 2010315B03Rik-003 protein_coding Mus_musculus 0.00000000000008 84
ENSMUST00000177714 2010315B03Rik-001 protein_coding Mus_musculus 0.00000000000008 84
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 0.00000000000008 84
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000165906 Gm4924-201 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000073201 Zfp958-201 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000005597 Zfp658-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000107972 Zfp658-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000109997 Zfp961-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000138304 Zfp961-004 processed_transcript Mus_musculus 0.0000001 64
ENSMUST00000131237 Zfp961-001 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000160457 Zfp945-201 protein_coding Mus_musculus 0.0000004 62
ENSMUST00000088696 Zfp945-001 protein_coding Mus_musculus 0.0000004 62
ENSMUST00000095615 Zfp945-004 retained_intron Mus_musculus 0.0000004 62
ENSMUST00000087666 Zfp952-001 protein_coding Mus_musculus 0.000005 58
ENSMUST00000141815 Zfp952-002 processed_transcript Mus_musculus 0.000005 58
ENSMUST00000054072 Zfp81-001 protein_coding Mus_musculus 0.000005 58
ENSDART00000101354 zgc:174234-201 protein_coding Danio_rerio 0.0002 53
ENSDART00000106428 zgc:174234-203 protein_coding Danio_rerio 0.0002 53
ENSDART00000130421 CABZ01021430.1-201 protein_coding Danio_rerio 0.0002 53

Loading