C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcineurin-like EF-hand protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187446 CHP1 9606 + 15:41230839-41281890 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334660 CHP1-001 41231143-41281890 protein_coding
  ENST00000392151 CHP1-002 41231239-41279719 nonsense_mediated_decay
  ENST00000558351 CHP1-009 41230839-41279435 processed_transcript
  ENST00000560397 CHP1-006 41231293-41279402 protein_coding
  ENST00000560411 CHP1-003 41231140-41279719 nonsense_mediated_decay
  ENST00000560633 CHP1-005 41256684-41272375 processed_transcript
  ENST00000560784 CHP1-008 41231222-41278840 nonsense_mediated_decay
  ENST00000560965 CHP1-004 41256910-41272375 protein_coding
  ENST00000561280 CHP1-007 41231239-41262866 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334660ENST00000560411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334660 50.574±0.00 13.536±0.00 2.244±0.00 11.653±3.83 27.660±21.48 24.826±1.91 15.650±8.34 41.454±3.24 39.384±27.92 22.014±11.46 29.978±21.88 18.224±6.85 14.158±4.30 12.710±4.03
ENST00000560411 N/A N/A 6.889±0.00 N/A N/A N/A N/A N/A 5.016±0.00 N/A 4.842±0.00 5.425±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZB CIL_0005ZB_0001 CGP 15:41182725-41281890
CIL_000790 CIL_000790_0001 CGP 15:41230839-41332621

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0001578 ISS microtubule bundle formation
GO:0001933 ISS negative regulation of protein phosphorylation
GO:0004860 IEA protein kinase inhibitor activity
GO:0005215 ISS transporter activity
GO:0005509 IDA:IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006469 ISS negative regulation of protein kinase activity
GO:0006611 ISS protein export from nucleus
GO:0006813 TAS potassium ion transport
GO:0007264 TAS small GTPase mediated signal transduction
GO:0008017 ISS microtubule binding
GO:0010923 IDA negative regulation of phosphatase activity
GO:0015459 TAS potassium channel regulator activity
GO:0015630 ISS microtubule cytoskeleton
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0019900 ISS kinase binding
GO:0022406 ISS membrane docking
GO:0030133 ISS transport vesicle
GO:0031122 ISS cytoplasmic microtubule organization
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031953 ISS negative regulation of protein autophosphorylation
GO:0032088 IDA negative regulation of NF-kappaB transcription factor activity
GO:0032417 ISS positive regulation of sodium:proton antiporter activity
GO:0042308 IDA negative regulation of protein import into nucleus
GO:0045056 IEA transcytosis
GO:0048306 IDA calcium-dependent protein binding
GO:0050821 ISS protein stabilization
GO:0051222 ISS positive regulation of protein transport
GO:0051259 IEA protein oligomerization
GO:0051453 IDA regulation of intracellular pH
GO:0060050 ISS positive regulation of protein glycosylation
GO:0061024 ISS membrane organization
GO:0061025 ISS membrane fusion
GO:0070062 IDA extracellular vesicular exosome
GO:0070885 IDA negative regulation of calcineurin-NFAT signaling cascade
GO:0071468 ISS cellular response to acidic pH
GO:0090314 ISS positive regulation of protein targeting to membrane
GO:1901214 IMP regulation of neuron death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052859 chp1 calcineurin-like EF hand protein 1 protein_coding Danio_rerio
ENSMUSG00000014077 Chp1 calcineurin-like EF hand protein 1 protein_coding Mus_musculus

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