C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcineurin-like EF-hand protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560411 CHP1-003 ENSG00000187446 9606 + 15:41231140-41279719 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryENST00000560411
Transcript ID Bladder Liver Muscle Ovary
ENST00000560411 6.889±0.00 5.016±0.00 4.842±0.00 5.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZB CIL_0005ZB_0001 CGP 15:41182725-41281890
CIL_000790 CIL_000790_0001 CGP 15:41230839-41332621

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014221 Chp1-001 protein_coding Mus_musculus 0 793
ENSMUST00000137585 Chp1-004 retained_intron Mus_musculus 0 767
ENSMUST00000119172 Chp1-002 protein_coding Mus_musculus 0 549
ENSMUST00000119618 Gm15364-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000132448 Chp1-003 protein_coding Mus_musculus 0 315
ENSMUST00000154406 Chp1-005 retained_intron Mus_musculus 0 315

Loading