C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: deleted in malignant brain tumors 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187908 DMBT1 9606 + 10:122560665-122643736 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330163 DMBT1-003 122560665-122643736 protein_coding
  ENST00000338354 DMBT1-001 122560665-122643736 protein_coding
  ENST00000344338 DMBT1-002 122560665-122643736 protein_coding
  ENST00000359586 DMBT1-201 122560665-122643736 protein_coding
  ENST00000368909 DMBT1-202 122560665-122643736 protein_coding
  ENST00000368955 DMBT1-203 122560665-122643736 protein_coding
  ENST00000368956 DMBT1-204 122560665-122643736 protein_coding
  ENST00000619379 DMBT1-205 122560665-122643736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000330163ENST00000344338ENST00000359586ENST00000368955ENST00000368956
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000330163 N/A 0.043±0.02 0.552±0.00 0.124±0.00 N/A N/A N/A 0.046±0.01 N/A N/A
ENST00000344338 N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A
ENST00000359586 0.172±0.00 0.087±0.06 0.072±0.00 0.230±0.00 0.097±0.00 0.066±0.05 36.738±0.00 0.228±0.01 0.016±0.00 0.302±0.00
ENST00000368955 N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A
ENST00000368956 N/A 0.043±0.02 0.552±0.00 0.124±0.00 N/A N/A N/A 0.046±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QM CIL_0000QM_0001 CGP 10:122461525-122643736
CIL_0001BH CIL_0001BH_0001 CGP 10:122560665-122699822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001824 IEA blastocyst development
GO:0001833 IEA inner cell mass cell proliferation
GO:0002221 TAS pattern recognition receptor signaling pathway
GO:0005044 TAS:IEA scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0006898 IEA receptor-mediated endocytosis
GO:0008329 TAS signaling pattern recognition receptor activity
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0019898 ISS extrinsic component of membrane
GO:0030670 IDA phagocytic vesicle membrane
GO:0030855 NAS epithelial cell differentiation
GO:0030858 IEA positive regulation of epithelial cell differentiation
GO:0035375 ISS zymogen binding
GO:0042589 ISS zymogen granule membrane
GO:0043152 TAS induction of bacterial agglutination
GO:0045087 TAS innate immune response
GO:0048306 TAS calcium-dependent protein binding
GO:0051607 IEA defense response to virus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000047517 Dmbt1 deleted in malignant brain tumors 1 protein_coding Mus_musculus

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