C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deleted in malignant brain tumors 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368956 DMBT1-204 ENSG00000187908 9606 + 10:122560665-122643736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryENST00000368956
Transcript ID Brain Breast Colon Ovary
ENST00000368956 0.043±0.02 0.552±0.00 0.124±0.00 0.046±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QM CIL_0000QM_0001 CGP 10:122461525-122643736
CIL_0001BH CIL_0001BH_0001 CGP 10:122560665-122699822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002221 TAS pattern recognition receptor signaling pathway
GO:0005044 TAS:IEA scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0006898 IEA receptor-mediated endocytosis
GO:0008329 TAS signaling pattern recognition receptor activity
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0019898 ISS extrinsic component of membrane
GO:0030670 IDA phagocytic vesicle membrane
GO:0030855 NAS epithelial cell differentiation
GO:0035375 ISS zymogen binding
GO:0042589 ISS zymogen granule membrane
GO:0043152 TAS induction of bacterial agglutination
GO:0045087 TAS innate immune response
GO:0048306 TAS calcium-dependent protein binding
GO:0051607 IEA defense response to virus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084509 Dmbt1-201 protein_coding Mus_musculus 0 302
ENSMUST00000093984 5830411N06Rik-202 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000164583 5830411N06Rik-203 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000059882 5830411N06Rik-201 protein_coding Mus_musculus 0.00000000002 77

Loading