C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166033-ENSG00000187908 CGP 9606 10:122461525-122643736
GeneTranscriptPositionBiotype
ENSG00000166033 (HTRA1)
HtrA serine peptidase 1 		ENST00000368984 (HTRA1-001) 122461525-122514908 protein_coding
ENST00000420892 (HTRA1-002) 122506691-122514907 protein_coding
ENSG00000187908 (DMBT1)
deleted in malignant brain tumors 1 		ENST00000330163 (DMBT1-003) 122560665-122643736 protein_coding
ENST00000338354 (DMBT1-001) 122560665-122643736 protein_coding
ENST00000344338 (DMBT1-002) 122560665-122643736 protein_coding
ENST00000359586 (DMBT1-201) 122560665-122643736 protein_coding
ENST00000368909 (DMBT1-202) 122560665-122643736 protein_coding
ENST00000368955 (DMBT1-203) 122560665-122643736 protein_coding
ENST00000368956 (DMBT1-204) 122560665-122643736 protein_coding
ENST00000619379 (DMBT1-205) 122560665-122643736 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000QM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006205-ENSMUSG00000047517 CGP 10090 7:130936111-131121626
GeneTranscriptPositionBiotype
ENSMUSG00000006205 (Htra1)
HtrA serine peptidase 1 		ENSMUST00000006367 (Htra1-001) 130936203-130985660 protein_coding
ENSMUST00000140741 (Htra1-004) 130981670-130982443 retained_intron
ENSMUST00000150717 (Htra1-003) 130936111-130979934 retained_intron
ENSMUST00000150905 (Htra1-005) 130982730-130985396 processed_transcript
ENSMUST00000153290 (Htra1-002) 130943489-130985660 processed_transcript
ENSMUSG00000047517 (Dmbt1)
deleted in malignant brain tumors 1 		ENSMUST00000084509 (Dmbt1-201) 131032076-131121626 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QM_0001ENSG00000166033ENST00000368984ENST00000420892ENSG00000187908ENST00000330163ENST00000338354ENST00000344338ENST00000359586ENST00000368909ENST00000368955ENST00000368956ENST00000619379CIL_0000QM_0002ENSMUSG00000006205ENSMUST00000006367ENSMUST00000140741ENSMUST00000150717ENSMUST00000150905ENSMUST00000153290ENSMUSG00000047517ENSMUST00000084509
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QM_0001ENSG00000166033ENST00000368984ENST00000420892ENSG00000187908ENST00000330163ENST00000344338ENST00000359586ENST00000368955ENST00000368956CIL_0000QM_0002ENSMUSG00000006205ENSMUST00000006367ENSMUST00000150717ENSMUST00000150905ENSMUST00000153290ENSMUSG00000047517ENSMUST00000084509
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166033 ENST00000368984 44.916±0.00 31.100±0.00 3.721±0.00 74.665±51.21 48.950±35.86 24.922±21.39 12.091±7.53 29.510±21.88 51.495±39.77 16.525±11.54 6.258±2.20 111.169±98.60 239.569±80.54 23.179±15.40
ENST00000420892 48.770±0.00 49.299±0.00 2.845±0.00 62.999±30.22 61.725±57.58 32.688±30.04 8.664±0.00 17.417±14.41 52.963±48.45 11.652±0.00 7.700±0.00 140.903±124.45 261.741±107.33 48.465±0.00
ENSG00000187908 ENST00000330163 N/A N/A N/A 0.043±0.02 0.552±0.00 0.124±0.00 N/A N/A N/A N/A N/A 0.046±0.01 N/A N/A
ENST00000338354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000344338 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A N/A
ENST00000359586 N/A 0.172±0.00 N/A 0.087±0.06 0.072±0.00 0.230±0.00 N/A 0.097±0.00 0.066±0.05 36.738±0.00 N/A 0.228±0.01 0.016±0.00 0.302±0.00
ENST00000368909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368955 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A N/A
ENST00000368956 N/A N/A N/A 0.043±0.02 0.552±0.00 0.124±0.00 N/A N/A N/A N/A N/A 0.046±0.01 N/A N/A
ENST00000619379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006205 ENSMUST00000006367 76.193±7.36 14.467±1.95 70.584±8.84 7.507±5.62 67.202±1.56 23.391±1.60 28.247±6.41 43.405±2.43 0.537±0.35 20.651±2.68 7.379±1.31 218.979±57.10 21.529±21.71 1.812±0.72
ENSMUST00000140741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150717 N/A 32.589±11.10 N/A N/A 56.816±24.95 15.102±2.38 N/A 7.300±0.00 0.444±0.09 10.632±3.74 N/A 115.158±24.97 N/A 0.349±0.00
ENSMUST00000150905 N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.22 N/A N/A N/A 1.901±0.00 1.775±0.50
ENSMUST00000153290 N/A N/A N/A 50.702±0.00 83.262±0.00 N/A 4.513±0.00 N/A 0.177±0.16 N/A 4.205±1.32 217.613±21.04 46.282±20.40 1.326±0.92
ENSMUSG00000047517 ENSMUST00000084509 0.029±0.02 0.046±0.02 0.128±0.02 0.003±0.00 39.186±10.08 512.302±41.11 0.010±0.00 0.005±0.00 0.113±0.07 1.641±1.14 0.006±0.00 0.108±0.05 0.010±0.00 0.171±0.07

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