C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mesoderm posterior basic helix-loop-helix transcription factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188095 MESP2 9606 + 15:89760591-89778754 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341735 MESP2-001 89776358-89778692 protein_coding
  ENST00000558723 MESP2-003 89760601-89778674 processed_transcript
  ENST00000560219 MESP2-002 89760591-89778754 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000341735ENST00000558723ENST00000560219
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000341735 0.324±0.00 0.206±0.00 0.441±0.00 0.592±0.00 0.408±0.00 N/A N/A 0.046±0.00 0.129±0.04 0.133±0.00 0.413±0.13
ENST00000558723 N/A N/A 0.376±0.00 N/A 0.104±0.00 0.068±0.00 0.109±0.00 N/A 0.150±0.10 0.104±0.00 0.348±0.00
ENST00000560219 N/A 0.149±0.00 0.066±0.00 0.195±0.00 0.102±0.00 N/A N/A N/A 0.167±0.00 N/A 0.370±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RA CIL_0002RA_0003 CGP 15:89748661-89778754
CIL_0002RF CIL_0002RF_0002 CGP 15:89760591-89815401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IEA somitogenesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007219 IEA Notch signaling pathway
GO:0008078 IEA mesodermal cell migration
GO:0023019 IEA signal transduction involved in regulation of gene expression
GO:0032525 IEA somite rostral/caudal axis specification
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017078 mespaa mesoderm posterior aa protein_coding Danio_rerio
ENSDARG00000030347 mespba mesoderm posterior ba protein_coding Danio_rerio
ENSDARG00000068761 mespab mesoderm posterior ab protein_coding Danio_rerio
ENSDARG00000087219 BX572619.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000097947 mespbb mesoderm posterior bb protein_coding Danio_rerio
ENSMUSG00000030543 Mesp2 mesoderm posterior 2 protein_coding Mus_musculus

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