C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030347-ENSDARG00000017078 CGP 7955 7:16082277-16101163
GeneTranscriptPositionBiotype
ENSDARG00000017078 (mespaa)
mesoderm posterior aa 		ENSDART00000006018 (mespaa-001) 16098653-16101163 protein_coding
ENSDARG00000030347 (mespba)
mesoderm posterior ba 		ENSDART00000045385 (mespba-001) 16082277-16085567 protein_coding
CIL_0002RA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068761-ENSDARG00000097947 CGP 7955 25:11382068-11393558
GeneTranscriptPositionBiotype
ENSDARG00000068761 (mespab)
mesoderm posterior ab 		ENSDART00000099572 (mespab-001) 11382068-11383326 protein_coding
ENSDARG00000097947 (mespbb)
mesoderm posterior bb 		ENSDART00000156846 (mespbb-001) 11392554-11393558 protein_coding
CIL_0002RA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166823-ENSG00000188095 CGP 9606 15:89748661-89778754
GeneTranscriptPositionBiotype
ENSG00000166823 (MESP1)
mesoderm posterior basic helix-loop-helix transcription factor 1 		ENST00000300057 (MESP1-001) 89748661-89751310 protein_coding
ENST00000559894 (MESP1-002) 89749891-89751137 processed_transcript
ENSG00000188095 (MESP2)
mesoderm posterior basic helix-loop-helix transcription factor 2 		ENST00000341735 (MESP2-001) 89776358-89778692 protein_coding
ENST00000558723 (MESP2-003) 89760601-89778674 processed_transcript
ENST00000560219 (MESP2-002) 89760591-89778754 protein_coding
ENSG00000259441 (MRPL15P1)
mitochondrial ribosomal protein L15 pseudogene 1 		ENST00000559543 (MRPL15P1-001) 89752296-89753493 processed_pseudogene
CIL_0002RA_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030544-ENSMUSG00000030543 CGP 10090 7:79792241-79813431
GeneTranscriptPositionBiotype
ENSMUSG00000030543 (Mesp2)
mesoderm posterior 2 		ENSMUST00000107394 (Mesp2-201) 79810727-79813431 protein_coding
ENSMUSG00000030544 (Mesp1)
mesoderm posterior 1 		ENSMUST00000032760 (Mesp1-001) 79792241-79793788 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RA_0001ENSDARG00000017078ENSDART00000006018ENSDARG00000030347ENSDART00000045385CIL_0002RA_0002ENSDARG00000068761ENSDART00000099572ENSDARG00000097947ENSDART00000156846CIL_0002RA_0003ENSG00000166823ENST00000300057ENST00000559894ENSG00000188095ENST00000341735ENST00000558723ENST00000560219ENSG00000259441ENST00000559543CIL_0002RA_0004ENSMUSG00000030543ENSMUST00000107394ENSMUSG00000030544ENSMUST00000032760
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RA_0001ENSDARG00000017078ENSDART00000006018ENSDARG00000030347ENSDART00000045385CIL_0002RA_0002ENSDARG00000068761ENSDART00000099572ENSDARG00000097947ENSDART00000156846CIL_0002RA_0003ENSG00000166823ENST00000300057ENST00000559894ENSG00000188095ENST00000341735ENST00000558723ENST00000560219ENSG00000259441ENST00000559543CIL_0002RA_0004ENSMUSG00000030543ENSMUST00000107394ENSMUSG00000030544ENSMUST00000032760
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017078 ENSDART00000006018 N/A N/A N/A N/A N/A N/A N/A 2.452±1.70 N/A N/A N/A N/A N/A N/A
ENSDARG00000030347 ENSDART00000045385 N/A N/A N/A N/A N/A N/A N/A 0.750±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068761 ENSDART00000099572 N/A N/A N/A N/A N/A N/A 2.269±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097947 ENSDART00000156846 N/A N/A N/A 0.124±0.04 N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166823 ENST00000300057 0.559±0.00 0.011±0.00 N/A 0.688±0.18 0.962±0.87 0.193±0.07 0.169±0.13 0.153±0.00 0.088±0.00 0.019±0.00 0.414±0.00 0.080±0.05 0.092±0.05 0.424±0.31
ENST00000559894 4.586±0.00 0.665±0.00 N/A 6.402±0.00 12.532±0.00 1.023±0.77 1.901±0.00 0.783±0.00 1.576±0.00 0.434±0.00 1.013±0.56 1.754±1.04 0.713±0.15 5.506±3.83
ENSG00000188095 ENST00000341735 0.324±0.00 0.206±0.00 N/A 0.441±0.00 0.592±0.00 0.408±0.00 N/A N/A N/A 0.046±0.00 N/A 0.129±0.04 0.133±0.00 0.413±0.13
ENST00000558723 N/A N/A N/A 0.376±0.00 N/A 0.104±0.00 0.068±0.00 0.109±0.00 N/A N/A N/A 0.150±0.10 0.104±0.00 0.348±0.00
ENST00000560219 N/A 0.149±0.00 N/A 0.066±0.00 0.195±0.00 0.102±0.00 N/A N/A N/A N/A N/A 0.167±0.00 N/A 0.370±0.00
ENSG00000259441 ENST00000559543 N/A N/A N/A N/A 0.441±0.00 N/A 0.013±0.00 N/A N/A N/A 0.013±0.00 N/A N/A 0.098±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030543 ENSMUST00000107394 0.176±0.10 0.346±0.10 0.036±0.02 0.364±0.22 0.322±0.11 0.399±0.16 0.052±0.03 0.228±0.05 0.055±0.04 3.245±0.32 0.035±0.00 1.887±0.88 0.026±0.01 2.440±0.97
ENSMUSG00000030544 ENSMUST00000032760 0.092±0.06 0.111±0.06 0.033±0.02 0.029±0.02 0.087±0.04 0.087±0.03 0.023±0.00 0.033±0.01 0.030±0.02 7.798±1.22 0.071±0.00 0.195±0.08 N/A 47.578±12.41

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