C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selectin L
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188404 SELL 9606 - 1:169690667-169711698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236147 SELL-001 169690667-169711698 protein_coding
  ENST00000460650 SELL-006 169703105-169704753 processed_transcript
  ENST00000463108 SELL-002 169701495-169711698 processed_transcript
  ENST00000466340 SELL-004 169704727-169710532 processed_transcript
  ENST00000479657 SELL-003 169703317-169708640 processed_transcript
  ENST00000497295 SELL-005 169691681-169703329 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000236147ENST00000460650ENST00000463108ENST00000466340ENST00000479657
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000236147 4.340±0.00 33.822±0.00 0.107±0.00 0.858±0.50 1.001±0.17 0.403±0.00 0.447±0.38 1.719±0.00 0.741±0.55 10.682±6.56 0.196±0.00 1.016±0.25 7.273±2.14 1.348±1.01
ENST00000460650 N/A N/A N/A N/A N/A 0.980±0.00 N/A 0.642±0.00 N/A N/A N/A N/A N/A N/A
ENST00000463108 N/A N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A 1.335±0.00 N/A N/A
ENST00000466340 N/A N/A 0.409±0.00 N/A 0.984±0.00 N/A 0.219±0.00 1.570±0.00 N/A 10.953±0.00 0.051±0.00 0.950±0.00 4.073±0.00 N/A
ENST00000479657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.392±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093H CIL_00093H_0001 VISTA 1:169641255-170243938

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002020 IPI protease binding
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007596 TAS blood coagulation
GO:0008201 TAS heparin binding
GO:0009897 IEA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0030246 IEA carbohydrate binding
GO:0033198 IEA response to ATP
GO:0043208 TAS glycosphingolipid binding
GO:0050776 TAS regulation of immune response
GO:0050839 IEA cell adhesion molecule binding
GO:0050900 TAS leukocyte migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009123 sele selectin E protein_coding Danio_rerio
ENSDARG00000042138 selp selectin P protein_coding Danio_rerio
ENSMUSG00000026581 Sell selectin, lymphocyte protein_coding Mus_musculus

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