C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selectin, lymphocyte
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026581 Sell 10090 + 1:164062076-164080785 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027871 Sell-201 164062076-164080782 protein_coding
  ENSMUST00000097491 Sell-202 164062076-164080785 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027871ENSMUST00000097491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027871 0.748±0.27 0.202±0.00 0.461±0.03 N/A 26.520±6.05 0.672±0.37 0.841±0.56 1.616±1.54 2.491±2.73 5.151±1.40 2.921±0.00 0.364±0.10 0.235±0.14 N/A
ENSMUST00000097491 N/A 0.128±0.06 N/A 0.020±0.02 N/A N/A N/A N/A 0.110±0.06 N/A 0.062±0.05 0.179±0.18 N/A 0.576±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093H CIL_00093H_0002 VISTA 1:163597221-164199818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007155 IEA cell adhesion
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0033198 IDA response to ATP
GO:0050839 IPI cell adhesion molecule binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009123 sele selectin E protein_coding Danio_rerio
ENSDARG00000042138 selp selectin P protein_coding Danio_rerio
ENSG00000188404 SELL selectin L protein_coding Homo_sapiens

Loading