C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: biogenesis of lysosomal organelles complex-1, subunit 5, muted
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188428 BLOC1S5 9606 - 6:8013567-8064414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244777 BLOC1S5-003 8013978-8064393 nonsense_mediated_decay
  ENST00000397457 BLOC1S5-001 8013567-8064414 protein_coding
  ENST00000475998 BLOC1S5-004 8015085-8018059 processed_transcript
  ENST00000486432 BLOC1S5-005 8015657-8041908 processed_transcript
  ENST00000543936 BLOC1S5-201 8013568-8064414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleENST00000397457
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle
ENST00000397457 2.967±0.00 1.310±0.00 7.956±0.00 2.216±1.22 6.415±3.71 3.188±0.00 1.193±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000161 CIL_000161_0002 CGP 6:7726797-8064364
CIL_00015W CIL_00015W_0002 CGP 6:7881517-8064414
CIL_00015V CIL_00015V_0002 CGP 6:8013567-8102530

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008089 ISS anterograde axon cargo transport
GO:0016192 IEA vesicle-mediated transport
GO:0030133 IEA transport vesicle
GO:0031083 IEA BLOC-1 complex
GO:0031175 ISS neuron projection development
GO:0032402 IDA melanosome transport
GO:0032438 NAS melanosome organization
GO:0032474 IEA otolith morphogenesis
GO:0035646 IDA endosome to melanosome transport
GO:0048066 IEA developmental pigmentation
GO:0048490 ISS anterograde synaptic vesicle transport
GO:0050942 IDA positive regulation of pigment cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058622 bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted protein_coding Danio_rerio
ENSMUSG00000038982 Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted protein_coding Mus_musculus

Loading