C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NDUFA4, mitochondrial complex associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189043 NDUFA4 9606 - 7:10931951-10940256 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339600 NDUFA4-001 10931951-10940256 protein_coding
  ENST00000463308 NDUFA4-004 10938104-10939051 retained_intron
  ENST00000470761 NDUFA4-005 10933665-10939834 retained_intron
  ENST00000482299 NDUFA4-002 10933515-10938517 retained_intron
  ENST00000486007 NDUFA4-003 10937867-10940079 retained_intron
  ENST00000492822 NDUFA4-006 10939213-10940135 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339600ENST00000470761ENST00000482299ENST00000486007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339600 12.317±0.00 17.317±0.00 3.906±0.00 29.375±2.26 9.563±6.43 9.773±5.44 35.160±21.78 12.432±2.10 8.465±2.82 6.630±3.50 13.019±5.58 14.637±8.73 10.819±6.05 9.404±8.52
ENST00000470761 30.605±0.00 46.306±0.00 N/A N/A 49.912±0.00 58.574±0.00 201.956±0.00 N/A N/A N/A N/A 41.700±0.00 N/A 26.726±23.50
ENST00000482299 N/A N/A N/A N/A N/A N/A 96.324±0.00 N/A N/A N/A N/A 36.469±0.00 14.917±0.81 3.037±0.00
ENST00000486007 N/A N/A N/A N/A 3.969±0.00 N/A 227.390±0.00 N/A 36.303±0.00 32.708±0.00 37.153±0.00 43.043±19.58 24.898±2.40 6.782±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022P CIL_00022P_0001 CGP 7:8433955-10940256
CIL_000895 CIL_000895_0001 VISTA 7:10344691-10945732
CIL_00022Q CIL_00022Q_0001 CGP 7:10931951-11169623

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004129 IMP cytochrome-c oxidase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IDA mitochondrial respiratory chain complex I
GO:0005751 IDA mitochondrial respiratory chain complex IV
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0022904 TAS respiratory electron transport chain
GO:0032403 IDA protein complex binding
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:1902600 IMP hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029632 Ndufa4 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 protein_coding Mus_musculus

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