C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal RNA processing 7 homolog A (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189306 RRP7A 9606 - 22:42509968-42519802 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323013 RRP7A-001 42509968-42519802 protein_coding
  ENST00000416699 RRP7A-003 42514677-42519794 nonsense_mediated_decay
  ENST00000483303 RRP7A-002 42515201-42519796 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323013ENST00000416699ENST00000483303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323013 6.940±0.00 7.991±0.00 0.984±0.00 4.064±2.43 2.991±0.70 2.885±1.37 1.411±0.84 6.607±0.00 2.154±0.96 3.506±1.96 1.338±0.43 9.044±3.73 15.720±9.42 7.639±1.73
ENST00000416699 N/A N/A N/A 3.089±0.00 2.146±0.00 3.038±0.00 1.406±0.00 N/A 4.167±0.00 7.650±0.00 2.540±0.00 17.114±0.00 14.904±5.71 17.737±0.00
ENST00000483303 10.058±0.00 N/A N/A N/A 8.093±0.00 N/A 3.855±0.00 N/A 5.822±0.00 9.955±0.00 4.240±0.00 37.124±0.00 36.270±0.00 27.245±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044853 rrp7a ribosomal RNA processing 7 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000018040 Rrp7a ribosomal RNA processing 7 homolog A (S. cerevisiae) protein_coding Mus_musculus

Loading