C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal RNA processing 7 homolog A (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018040 Rrp7a 10090 - 15:83113433-83122801 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018184 Rrp7a-001 83113433-83122801 protein_coding
  ENSMUST00000166019 Rrp7a-002 83119255-83122149 protein_coding
  ENSMUST00000166766 Rrp7a-003 83115848-83117616 nonsense_mediated_decay
  ENSMUST00000167483 Rrp7a-004 83119281-83122751 nonsense_mediated_decay
  ENSMUST00000167589 Rrp7a-005 83117226-83118346 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018184ENSMUST00000166766ENSMUST00000167483
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018184 16.632±4.46 8.933±2.52 8.913±2.55 9.232±1.36 8.824±0.89 14.721±1.71 4.977±0.39 10.864±0.35 6.265±2.01 7.582±2.84 6.418±0.65 15.464±4.20 28.588±15.47 12.228±1.12
ENSMUST00000166766 N/A 48.558±5.97 N/A 30.595±2.63 40.061±8.02 N/A N/A 39.092±0.00 23.410±0.00 N/A N/A 60.183±10.05 133.284±10.29 34.784±2.67
ENSMUST00000167483 N/A 38.924±8.04 N/A N/A 28.024±4.75 42.910±5.89 11.770±0.00 28.228±6.94 10.839±0.42 27.579±4.43 N/A 29.664±2.35 N/A 33.153±8.54

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044853 rrp7a ribosomal RNA processing 7 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSG00000189306 RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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