C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal RNA processing 7 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323013 RRP7A-001 ENSG00000189306 9606 - 22:42509968-42519802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323013
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323013 6.940±0.00 7.991±0.00 0.984±0.00 4.064±2.43 2.991±0.70 2.885±1.37 1.411±0.84 6.607±0.00 2.154±0.96 3.506±1.96 1.338±0.43 9.044±3.73 15.720±9.42 7.639±1.73

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179930 Gm3436-201 processed_pseudogene Mus_musculus 0 732
ENSMUST00000018184 Rrp7a-001 protein_coding Mus_musculus 5e-16 92
ENSMUST00000169461 Serhl-017 retained_intron Mus_musculus 0.00000000001 77
ENSMUST00000167750 Serhl-015 processed_transcript Mus_musculus 0.00000000001 77
ENSMUST00000166427 Serhl-004 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000167645 Serhl-003 retained_intron Mus_musculus 0.00000000001 77
ENSMUST00000078218 Serhl-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000170891 Serhl-012 processed_transcript Mus_musculus 0.0000000002 73
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000004 62

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