C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat containing, X-linked 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196440 ARMCX4 9606 + X:101418287-101533459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354842 ARMCX4-001 101485475-101533459 nonsense_mediated_decay
  ENST00000423738 ARMCX4-010 101488044-101495811 protein_coding
  ENST00000430461 ARMCX4-007 101418298-101446132 processed_transcript
  ENST00000431677 ARMCX4-008 101418782-101447877 processed_transcript
  ENST00000433011 ARMCX4-006 101418287-101533459 nonsense_mediated_decay
  ENST00000442270 ARMCX4-005 101485456-101533459 nonsense_mediated_decay
  ENST00000445416 ARMCX4-004 101485254-101516954 nonsense_mediated_decay
  ENST00000452188 ARMCX4-003 101485433-101533459 nonsense_mediated_decay
  ENST00000453574 ARMCX4-009 101418299-101419183 processed_transcript
  ENST00000455331 ARMCX4-002 101485453-101499044 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354842ENST00000423738ENST00000431677ENST00000433011ENST00000442270ENST00000445416ENST00000452188
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354842 N/A N/A N/A 0.429±0.00 0.252±0.00 N/A N/A 0.467±0.00 N/A N/A 1.614±1.21 0.150±0.00 0.611±0.00
ENST00000423738 0.781±0.00 2.596±0.00 3.401±0.00 0.506±0.10 0.541±0.36 0.434±0.36 1.232±0.00 0.275±0.03 0.288±0.00 0.509±0.24 3.393±0.65 0.537±0.00 1.234±0.00
ENST00000431677 N/A N/A N/A N/A N/A N/A N/A 2.888±0.00 N/A N/A N/A N/A N/A
ENST00000433011 N/A N/A N/A N/A 0.191±0.00 N/A N/A 0.385±0.00 0.230±0.00 N/A N/A N/A 0.366±0.00
ENST00000442270 N/A N/A N/A N/A N/A N/A 0.593±0.00 N/A 0.375±0.00 N/A N/A N/A N/A
ENST00000445416 N/A N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A N/A N/A N/A
ENST00000452188 N/A N/A N/A N/A N/A N/A N/A 0.410±0.00 0.216±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E3 CIL_0000E3_0001 CGP X:101408295-101533459
CIL_000028 CIL_000028_0001 CGP X:101418287-101554700

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062960 ARMCX3 armadillo repeat containing, X-linked 3 protein_coding Danio_rerio
ENSMUSG00000049804 Armcx4 armadillo repeat containing, X-linked 4 protein_coding Mus_musculus

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