C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000028_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196440-ENSG00000126947 CGP 9606 X:101418287-101554700
GeneTranscriptPositionBiotype
ENSG00000126947 (ARMCX1)
armadillo repeat containing, X-linked 1 		ENST00000372829 (ARMCX1-001) 101550531-101554700 protein_coding
ENST00000616751 (ARMCX1-201) 101550602-101554688 protein_coding
ENSG00000196440 (ARMCX4)
armadillo repeat containing, X-linked 4 		ENST00000354842 (ARMCX4-001) 101485475-101533459 nonsense_mediated_decay
ENST00000423738 (ARMCX4-010) 101488044-101495811 protein_coding
ENST00000430461 (ARMCX4-007) 101418298-101446132 processed_transcript
ENST00000431677 (ARMCX4-008) 101418782-101447877 processed_transcript
ENST00000433011 (ARMCX4-006) 101418287-101533459 nonsense_mediated_decay
ENST00000442270 (ARMCX4-005) 101485456-101533459 nonsense_mediated_decay
ENST00000445416 (ARMCX4-004) 101485254-101516954 nonsense_mediated_decay
ENST00000452188 (ARMCX4-003) 101485433-101533459 nonsense_mediated_decay
ENST00000453574 (ARMCX4-009) 101418299-101419183 processed_transcript
ENST00000455331 (ARMCX4-002) 101485453-101499044 nonsense_mediated_decay
ENSG00000221132 (AL035422.1)
 ENST00000408205 (AL035422.1-201) 101427393-101427495 miRNA
ENSG00000237682 (RP3-514P16.1)
 ENST00000392722 (RP3-514P16.1-001) 101537485-101539276 processed_pseudogene
CIL_000028_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049804-ENSMUSG00000033460 CGP 10090 X:134686519-134721917
GeneTranscriptPositionBiotype
ENSMUSG00000033460 (Armcx1)
armadillo repeat containing, X-linked 1 		ENSMUST00000035748 (Armcx1-002) 134717989-134721917 protein_coding
ENSMUST00000051256 (Armcx1-004) 134717970-134721917 protein_coding
ENSMUST00000113197 (Armcx1-003) 134718020-134721917 protein_coding
ENSMUST00000113198 (Armcx1-005) 134718013-134721908 protein_coding
ENSMUST00000113199 (Armcx1-001) 134717988-134721910 protein_coding
ENSMUST00000113201 (Armcx1-006) 134717963-134721908 protein_coding
ENSMUST00000125684 (Armcx1-007) 134718003-134719028 processed_transcript
ENSMUST00000129697 (Armcx1-010) 134717988-134719313 processed_transcript
ENSMUST00000137173 (Armcx1-009) 134719257-134720515 processed_transcript
ENSMUST00000138421 (Armcx1-008) 134718003-134719503 processed_transcript
ENSMUSG00000049804 (Armcx4)
armadillo repeat containing, X-linked 4 		ENSMUST00000124226 (Armcx4-001) 134686519-134696757 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000028_0001ENSG00000126947ENST00000372829ENST00000616751ENSG00000196440ENST00000354842ENST00000423738ENST00000430461ENST00000431677ENST00000433011ENST00000442270ENST00000445416ENST00000452188ENST00000453574ENST00000455331ENSG00000221132ENST00000408205ENSG00000237682ENST00000392722CIL_000028_0002ENSMUSG00000033460ENSMUST00000035748ENSMUST00000051256ENSMUST00000113197ENSMUST00000113198ENSMUST00000113199ENSMUST00000113201ENSMUST00000125684ENSMUST00000129697ENSMUST00000137173ENSMUST00000138421ENSMUSG00000049804ENSMUST00000124226
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000028_0001ENSG00000126947ENST00000372829ENST00000616751ENSG00000196440ENST00000354842ENST00000423738ENST00000431677ENST00000433011ENST00000442270ENST00000445416ENST00000452188ENSG00000221132ENST00000408205ENSG00000237682ENST00000392722CIL_000028_0002ENSMUSG00000033460ENSMUST00000035748ENSMUST00000051256ENSMUST00000113197ENSMUST00000113198ENSMUST00000113199ENSMUST00000113201ENSMUST00000129697ENSMUST00000137173ENSMUST00000138421ENSMUSG00000049804ENSMUST00000124226
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126947 ENST00000372829 12.457±0.00 5.204±0.00 1.132±0.00 6.327±0.74 10.022±0.00 24.987±0.00 3.825±3.22 4.546±0.00 1.618±0.97 6.666±3.22 1.299±0.00 9.434±4.18 3.269±1.01 7.651±4.13
ENST00000616751 N/A N/A 0.330±0.00 4.215±0.00 1.523±0.37 5.640±2.97 3.311±0.66 2.094±1.84 3.143±0.00 N/A 3.603±1.94 4.726±3.22 2.948±0.50 N/A
ENSG00000196440 ENST00000354842 N/A N/A N/A N/A 0.429±0.00 0.252±0.00 N/A N/A 0.467±0.00 N/A N/A 1.614±1.21 0.150±0.00 0.611±0.00
ENST00000423738 0.781±0.00 2.596±0.00 N/A 3.401±0.00 0.506±0.10 0.541±0.36 0.434±0.36 1.232±0.00 0.275±0.03 0.288±0.00 0.509±0.24 3.393±0.65 0.537±0.00 1.234±0.00
ENST00000430461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431677 N/A N/A N/A N/A N/A N/A N/A N/A 2.888±0.00 N/A N/A N/A N/A N/A
ENST00000433011 N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A 0.385±0.00 0.230±0.00 N/A N/A N/A 0.366±0.00
ENST00000442270 N/A N/A N/A N/A N/A N/A N/A 0.593±0.00 N/A 0.375±0.00 N/A N/A N/A N/A
ENST00000445416 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A N/A N/A N/A
ENST00000452188 N/A N/A N/A N/A N/A N/A N/A N/A 0.410±0.00 0.216±0.00 N/A N/A N/A N/A
ENST00000453574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221132 ENST00000408205 N/A N/A N/A 0.992±0.00 2.919±0.00 N/A 0.878±0.00 2.141±0.00 N/A 0.488±0.00 0.440±0.00 N/A 0.573±0.00 0.527±0.00
ENSG00000237682 ENST00000392722 0.006±0.00 N/A 0.124±0.00 0.060±0.00 0.061±0.00 0.037±0.00 N/A N/A N/A 0.074±0.00 N/A 0.016±0.00 0.027±0.00 0.013±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033460 ENSMUST00000035748 1.127±0.00 0.752±0.00 1.673±0.70 4.525±0.25 0.414±0.00 N/A 0.409±0.11 0.610±0.00 1.333±0.28 0.601±0.00 0.210±0.00 1.640±1.03 0.933±0.35 0.449±0.23
ENSMUST00000051256 1.438±0.06 0.870±0.31 2.144±0.08 6.742±3.88 1.213±0.45 0.576±0.36 0.333±0.22 0.620±0.04 0.541±0.41 1.197±0.20 0.209±0.10 2.825±2.01 1.364±0.15 0.215±0.00
ENSMUST00000113197 N/A N/A N/A N/A 0.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113198 0.628±0.00 0.610±0.18 1.163±0.00 5.353±0.42 0.722±0.00 0.555±0.30 0.328±0.05 0.829±0.29 0.513±0.41 1.242±0.08 0.353±0.20 1.959±0.60 0.665±0.22 0.264±0.12
ENSMUST00000113199 2.519±1.71 0.917±0.00 3.958±1.02 7.278±0.63 0.829±0.28 0.644±0.28 0.327±0.01 0.698±0.18 1.987±0.90 2.305±1.08 0.356±0.14 3.140±1.91 1.825±1.20 0.282±0.00
ENSMUST00000113201 N/A 1.003±0.00 N/A 6.394±0.00 0.539±0.00 0.436±0.06 N/A N/A 1.107±0.00 1.205±0.00 0.236±0.00 0.688±0.00 0.694±0.24 N/A
ENSMUST00000125684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129697 N/A 0.322±0.00 N/A N/A N/A 0.183±0.00 N/A N/A 0.069±0.00 N/A 0.294±0.00 N/A N/A N/A
ENSMUST00000137173 N/A 2.087±1.05 N/A N/A 0.685±0.08 0.568±0.00 N/A 0.841±0.03 0.346±0.10 N/A N/A 3.250±1.87 N/A 0.640±0.00
ENSMUST00000138421 N/A N/A N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000049804 ENSMUST00000124226 0.511±0.22 1.106±0.15 0.450±0.11 13.845±3.63 0.528±0.30 0.365±0.12 0.621±0.22 0.572±0.18 0.534±0.48 1.082±0.35 0.724±0.29 2.128±1.66 1.719±0.70 0.150±0.07

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