C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000E3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126945-ENSG00000196440 CGP 9606 X:101408295-101533459
GeneTranscriptPositionBiotype
ENSG00000126945 (HNRNPH2)
heterogeneous nuclear ribonucleoprotein H2 (H') 		ENST00000316594 (HNRNPH2-001) 101408295-101414133 protein_coding
ENSG00000196440 (ARMCX4)
armadillo repeat containing, X-linked 4 		ENST00000354842 (ARMCX4-001) 101485475-101533459 nonsense_mediated_decay
ENST00000423738 (ARMCX4-010) 101488044-101495811 protein_coding
ENST00000430461 (ARMCX4-007) 101418298-101446132 processed_transcript
ENST00000431677 (ARMCX4-008) 101418782-101447877 processed_transcript
ENST00000433011 (ARMCX4-006) 101418287-101533459 nonsense_mediated_decay
ENST00000442270 (ARMCX4-005) 101485456-101533459 nonsense_mediated_decay
ENST00000445416 (ARMCX4-004) 101485254-101516954 nonsense_mediated_decay
ENST00000452188 (ARMCX4-003) 101485433-101533459 nonsense_mediated_decay
ENST00000453574 (ARMCX4-009) 101418299-101419183 processed_transcript
ENST00000455331 (ARMCX4-002) 101485453-101499044 nonsense_mediated_decay
ENSG00000221132 (AL035422.1)
 ENST00000408205 (AL035422.1-201) 101427393-101427495 miRNA
ENSG00000257529 (RPL36A-HNRNPH2)
RPL36A-HNRNPH2 readthrough 		ENST00000409170 (RPL36A-HNRNPH2-002) 101391012-101412165 protein_coding
ENST00000409338 (RPL36A-HNRNPH2-001) 101391011-101412297 protein_coding
CIL_0000E3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045427-ENSMUSG00000049804 CGP 10090 X:134601179-134696757
GeneTranscriptPositionBiotype
ENSMUSG00000045427 (Hnrnph2)
heterogeneous nuclear ribonucleoprotein H2 		ENSMUST00000050331 (Hnrnph2-004) 134601271-134606384 protein_coding
ENSMUST00000059297 (Hnrnph2-002) 134601286-134607054 protein_coding
ENSMUST00000074950 (Hnrnph2-001) 134601179-134607054 protein_coding
ENSMUST00000113202 (Hnrnph2-005) 134601258-134606758 protein_coding
ENSMUST00000113203 (Hnrnph2-003) 134601225-134607060 protein_coding
ENSMUSG00000049804 (Armcx4)
armadillo repeat containing, X-linked 4 		ENSMUST00000124226 (Armcx4-001) 134686519-134696757 protein_coding
ENSMUSG00000082655 (Gm7857)
predicted gene 7857 		ENSMUST00000117957 (Gm7857-001) 134681520-134681877 processed_pseudogene
ENSMUSG00000085226 (Gm7855)
predicted gene 7855 		ENSMUST00000137737 (Gm7855-001) 134625058-134625744 processed_pseudogene
ENSMUSG00000087024 (B230119M05Rik)
RIKEN cDNA B230119M05 gene 		ENSMUST00000154072 (B230119M05Rik-001) 134684562-134686462 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E3_0001ENSG00000126945ENST00000316594ENSG00000196440ENST00000354842ENST00000423738ENST00000430461ENST00000431677ENST00000433011ENST00000442270ENST00000445416ENST00000452188ENST00000453574ENST00000455331ENSG00000221132ENST00000408205ENSG00000257529ENST00000409170ENST00000409338CIL_0000E3_0002ENSMUSG00000045427ENSMUST00000050331ENSMUST00000059297ENSMUST00000074950ENSMUST00000113202ENSMUST00000113203ENSMUSG00000049804ENSMUST00000124226ENSMUSG00000082655ENSMUST00000117957ENSMUSG00000085226ENSMUST00000137737ENSMUSG00000087024ENSMUST00000154072
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E3_0001ENSG00000126945ENST00000316594ENSG00000196440ENST00000354842ENST00000423738ENST00000431677ENST00000433011ENST00000442270ENST00000445416ENST00000452188ENSG00000221132ENST00000408205ENSG00000257529ENST00000409170CIL_0000E3_0002ENSMUSG00000045427ENSMUST00000050331ENSMUST00000059297ENSMUST00000074950ENSMUST00000113202ENSMUST00000113203ENSMUSG00000049804ENSMUST00000124226ENSMUSG00000082655ENSMUST00000117957ENSMUSG00000085226ENSMUST00000137737ENSMUSG00000087024ENSMUST00000154072
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126945 ENST00000316594 43.335±0.00 47.555±0.00 N/A 33.864±24.38 28.716±0.00 23.930±12.23 21.803±0.00 28.329±17.69 11.880±5.46 22.343±14.23 23.021±0.00 38.577±5.86 33.228±7.88 28.029±7.03
ENSG00000196440 ENST00000354842 N/A N/A N/A N/A 0.429±0.00 0.252±0.00 N/A N/A 0.467±0.00 N/A N/A 1.614±1.21 0.150±0.00 0.611±0.00
ENST00000423738 0.781±0.00 2.596±0.00 N/A 3.401±0.00 0.506±0.10 0.541±0.36 0.434±0.36 1.232±0.00 0.275±0.03 0.288±0.00 0.509±0.24 3.393±0.65 0.537±0.00 1.234±0.00
ENST00000430461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431677 N/A N/A N/A N/A N/A N/A N/A N/A 2.888±0.00 N/A N/A N/A N/A N/A
ENST00000433011 N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A 0.385±0.00 0.230±0.00 N/A N/A N/A 0.366±0.00
ENST00000442270 N/A N/A N/A N/A N/A N/A N/A 0.593±0.00 N/A 0.375±0.00 N/A N/A N/A N/A
ENST00000445416 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A N/A N/A N/A
ENST00000452188 N/A N/A N/A N/A N/A N/A N/A N/A 0.410±0.00 0.216±0.00 N/A N/A N/A N/A
ENST00000453574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221132 ENST00000408205 N/A N/A N/A 0.992±0.00 2.919±0.00 N/A 0.878±0.00 2.141±0.00 N/A 0.488±0.00 0.440±0.00 N/A 0.573±0.00 0.527±0.00
ENSG00000257529 ENST00000409170 N/A N/A N/A N/A N/A 20.349±0.00 10.259±0.00 N/A 14.503±0.00 N/A 21.809±0.00 40.063±0.00 N/A N/A
ENST00000409338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045427 ENSMUST00000050331 3.700±0.41 1.625±0.20 N/A 18.315±0.00 2.531±0.53 1.752±0.40 3.985±2.00 3.439±0.74 5.838±3.19 6.392±2.75 3.617±0.42 5.508±3.85 3.801±0.95 2.316±1.86
ENSMUST00000059297 N/A 2.116±0.00 6.088±0.01 8.620±0.97 N/A 1.025±0.00 2.501±0.48 1.769±0.27 7.917±4.80 1.960±0.00 4.745±0.91 N/A 3.626±1.21 N/A
ENSMUST00000074950 4.757±0.90 1.665±0.54 17.214±1.30 13.308±5.51 3.904±0.61 2.722±0.52 4.677±0.64 7.031±1.32 13.099±9.20 7.321±1.25 7.868±0.91 5.779±6.30 6.615±4.40 2.346±0.97
ENSMUST00000113202 3.863±1.17 2.838±0.61 4.326±0.65 5.392±3.35 2.698±0.40 1.708±0.19 1.811±0.17 1.635±0.24 2.666±1.74 4.821±0.49 N/A 4.004±1.16 1.697±0.92 0.747±0.12
ENSMUST00000113203 N/A N/A N/A 3.696±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.179±0.03 N/A
ENSMUSG00000049804 ENSMUST00000124226 0.511±0.22 1.106±0.15 0.450±0.11 13.845±3.63 0.528±0.30 0.365±0.12 0.621±0.22 0.572±0.18 0.534±0.48 1.082±0.35 0.724±0.29 2.128±1.66 1.719±0.70 0.150±0.07
ENSMUSG00000082655 ENSMUST00000117957 N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A 0.154±0.10 N/A
ENSMUSG00000085226 ENSMUST00000137737 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087024 ENSMUST00000154072 0.071±0.02 N/A 0.008±0.00 0.262±0.04 N/A N/A N/A N/A 0.026±0.01 N/A N/A 0.026±0.00 0.030±0.02 N/A

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