C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196449 YRDC 9606 - 1:37802944-37808185 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373044 YRDC-001 37802944-37808185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373044 3.298±0.00 4.458±0.00 0.077±0.00 3.470±0.69 2.730±0.41 1.540±0.73 1.314±0.98 4.035±2.44 3.990±2.67 3.950±2.95 2.016±0.00 3.514±1.46 8.859±5.08 10.978±1.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095Y CIL_00095Y_0001 VISTA 1:37729017-38330016
CIL_0007UI CIL_0007UI_0001 VISTA 1:37794522-38395934

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003725 IEA double-stranded RNA binding
GO:0005515 IEA protein binding
GO:0005739 IEA mitochondrion
GO:0016020 IEA membrane
GO:0051051 IDA negative regulation of transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041428 yrdc yrdC N(6)-threonylcarbamoyltransferase domain containing protein_coding Danio_rerio
ENSMUSG00000028889 Yrdc yrdC domain containing (E.coli) protein_coding Mus_musculus

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