C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thiamin pyrophosphokinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196511 TPK1 9606 - 7:144451941-144836395 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360057 TPK1-001 144451941-144836053 protein_coding
  ENST00000378098 TPK1-002 144452582-144836053 nonsense_mediated_decay
  ENST00000378099 TPK1-201 144451950-144836053 protein_coding
  ENST00000481645 TPK1-003 144619181-144739477 retained_intron
  ENST00000482940 TPK1-004 144451941-144738922 nonsense_mediated_decay
  ENST00000489798 TPK1-006 144643544-144738924 nonsense_mediated_decay
  ENST00000538212 TPK1-014 144451943-144724159 protein_coding
  ENST00000546806 TPK1-009 144681740-144738891 processed_transcript
  ENST00000547966 TPK1-012 144453428-144666702 processed_transcript
  ENST00000548460 TPK1-008 144835131-144835999 processed_transcript
  ENST00000548831 TPK1-011 144591137-144646114 processed_transcript
  ENST00000551062 TPK1-013 144531110-144666718 processed_transcript
  ENST00000552881 TPK1-007 144591424-144836395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360057ENST00000378098ENST00000378099ENST00000481645ENST00000482940ENST00000538212ENST00000547966ENST00000548460ENST00000548831ENST00000552881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360057 1.312±0.00 2.012±0.00 N/A 0.433±0.00 0.647±0.00 0.499±0.00 0.691±0.00 1.377±0.00 1.039±0.20 1.232±0.50 N/A 0.797±0.52 1.376±0.63 N/A
ENST00000378098 N/A N/A 0.638±0.00 N/A 0.467±0.00 0.786±0.00 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000378099 0.522±0.00 0.426±0.00 N/A N/A N/A 0.368±0.00 N/A N/A N/A N/A 0.242±0.00 N/A 0.718±0.03 N/A
ENST00000481645 N/A N/A 0.159±0.00 N/A N/A 0.183±0.00 N/A N/A 0.248±0.00 N/A N/A 0.189±0.00 N/A N/A
ENST00000482940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.771±0.00
ENST00000538212 N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A 0.406±0.00 N/A N/A N/A N/A N/A
ENST00000547966 N/A N/A N/A 0.694±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.235±0.00 2.943±0.00
ENST00000548460 N/A N/A N/A N/A N/A N/A N/A 2.290±0.00 N/A N/A 0.529±0.00 1.149±0.00 N/A N/A
ENST00000548831 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.316±0.00 N/A N/A N/A N/A
ENST00000552881 N/A N/A 1.541±0.00 4.849±0.00 1.282±0.00 N/A 0.771±0.00 1.465±0.00 N/A 2.165±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XS CIL_0004XS_0001 CGP 7:144397240-144836395
CIL_0004XR CIL_0004XR_0001 CGP 7:144451941-148420998

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004788 TAS:IEA thiamine diphosphokinase activity
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006772 IEA thiamine metabolic process
GO:0009229 IEA thiamine diphosphate biosynthetic process
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0030975 IEA thiamine binding
GO:0042723 TAS thiamine-containing compound metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038040 tpk1 thiamin pyrophosphokinase 1 protein_coding Danio_rerio
ENSMUSG00000029735 Tpk1 thiamine pyrophosphokinase protein_coding Mus_musculus

Loading