C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 30B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408939 TTC30B-001 ENSG00000196659 9606 - 2:177548998-177553014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408939 0.250±0.00 0.850±0.00 0.534±0.00 0.733±0.13 0.644±0.49 0.551±0.36 0.251±0.00 1.053±0.49 0.449±0.18 0.275±0.07 0.133±0.01 1.095±0.15 0.717±0.14 3.023±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017H CIL_00017H_0001 CGP 2:177392644-177553014
CIL_00017I CIL_00017I_0001 CGP 2:177548998-177618966

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005929 IBA cilium
GO:0030992 IBA intraciliary transport particle B
GO:0042073 IBA intraciliary transport
GO:0042384 IBA cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099996 Ttc30b-001 protein_coding Mus_musculus 0 2290
ENSMUST00000099995 Ttc30a2-001 protein_coding Mus_musculus 0 2237
ENSMUST00000099994 Ttc30a1-001 protein_coding Mus_musculus 0 2180

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