C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cholinergic receptor, nicotinic, gamma (muscle)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196811 CHRNG 9606 + 2:232539727-232546403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389492 CHRNG-004 232539748-232545716 protein_coding
  ENST00000389494 CHRNG-001 232539727-232546403 protein_coding
  ENST00000485094 CHRNG-003 232539727-232541882 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMuscleOvaryPlacentaTestisENST00000389492ENST00000389494ENST00000485094
Transcript ID Brain Breast Liver Muscle Ovary Placenta Testis
ENST00000389492 0.049±0.00 0.045±0.00 0.018±0.00 1.944±0.00 N/A N/A N/A
ENST00000389494 0.098±0.00 N/A N/A 2.926±0.00 0.120±0.04 0.027±0.00 0.173±0.04
ENST00000485094 0.038±0.00 0.425±0.00 N/A N/A N/A 0.149±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HU CIL_0003HU_0001 CGP 2:232525993-232546403

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005892 IEA acetylcholine-gated channel complex
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0006812 IEA cation transport
GO:0006936 TAS muscle contraction
GO:0007165 TAS signal transduction
GO:0007268 TAS synaptic transmission
GO:0015267 TAS channel activity
GO:0015464 TAS acetylcholine receptor activity
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0042391 IEA regulation of membrane potential
GO:0045211 IEA postsynaptic membrane
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026253 Chrng cholinergic receptor, nicotinic, gamma polypeptide protein_coding Mus_musculus

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