C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197037 ZSCAN25 9606 + 7:99616946-99632407 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262941 ZSCAN25-201 99619625-99630271 protein_coding
  ENST00000334715 ZSCAN25-202 99619550-99632407 protein_coding
  ENST00000394150 ZSCAN25-002 99616948-99630904 nonsense_mediated_decay
  ENST00000394152 ZSCAN25-001 99616948-99632407 protein_coding
  ENST00000431485 ZSCAN25-005 99616966-99619816 protein_coding
  ENST00000466948 ZSCAN25-008 99619665-99630908 processed_transcript
  ENST00000473646 ZSCAN25-006 99616953-99624484 retained_intron
  ENST00000481424 ZSCAN25-003 99616946-99632399 retained_intron
  ENST00000485586 ZSCAN25-004 99621061-99632371 retained_intron
  ENST00000493443 ZSCAN25-007 99616953-99629468 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262941ENST00000334715ENST00000394150ENST00000394152ENST00000431485ENST00000466948ENST00000481424ENST00000485586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262941 1.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.00 N/A
ENST00000334715 0.552±0.00 2.388±0.00 N/A 1.275±0.00 0.870±0.00 1.003±0.00 N/A 0.975±0.00 0.404±0.00 1.024±0.00 0.581±0.00 2.446±0.65 1.200±0.13 2.430±0.00
ENST00000394150 N/A N/A N/A 0.384±0.00 0.469±0.00 1.693±0.00 0.602±0.00 0.908±0.00 1.658±0.00 N/A 0.373±0.00 1.834±0.00 N/A 1.235±0.00
ENST00000394152 N/A N/A 0.180±0.00 0.889±0.00 0.916±0.07 N/A 0.539±0.01 N/A 0.671±0.21 0.770±0.00 0.317±0.00 1.249±0.35 1.159±0.00 0.791±0.00
ENST00000431485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.243±0.00 N/A N/A N/A
ENST00000466948 N/A N/A N/A N/A 1.966±0.00 N/A 2.159±0.00 N/A N/A N/A 1.975±0.00 N/A N/A N/A
ENST00000481424 N/A 0.514±0.00 N/A 0.232±0.05 N/A N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A N/A
ENST00000485586 N/A 0.408±0.00 N/A 0.365±0.00 0.320±0.00 N/A N/A N/A N/A 0.546±0.00 N/A 0.529±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TG CIL_0004TG_0001 CGP 7:99616946-99679998

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000070420 Zscan25 zinc finger and SCAN domain containing 25 protein_coding Mus_musculus

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