C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394150 ZSCAN25-002 ENSG00000197037 9606 + 7:99616948-99630904 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000394150
Transcript ID Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000394150 0.384±0.00 0.469±0.00 1.693±0.00 0.602±0.00 0.908±0.00 1.658±0.00 0.373±0.00 1.834±0.00 1.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TG CIL_0004TG_0001 CGP 7:99616946-99679998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 0 1487
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 3e-37 161
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 3e-37 161
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 3e-37 161
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 2e-28 132
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 2e-28 132
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 1e-26 126
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 1e-26 126
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 1e-26 126
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 1e-26 126
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 1e-26 126
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 1e-26 126
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 6e-24 117
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 6e-24 117
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 6e-24 117
ENSMUST00000075916 Zfp12-003 nonsense_mediated_decay Mus_musculus 0.0000000001 73
ENSMUST00000032591 Zfp12-001 protein_coding Mus_musculus 0.0000000001 73
ENSMUST00000077485 Zfp12-002 protein_coding Mus_musculus 0.0000000001 73

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