C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004TG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197037-ENSG00000106258 CGP 9606 7:99616946-99679998
GeneTranscriptPositionBiotype
ENSG00000106258 (CYP3A5)
cytochrome P450, family 3, subfamily A, polypeptide 5 		ENST00000222982 (CYP3A5-001) 99648194-99679996 protein_coding
ENST00000339843 (CYP3A5-201) 99648200-99679998 protein_coding
ENST00000439761 (CYP3A5-003) 99671222-99679996 protein_coding
ENST00000456417 (CYP3A5-011) 99672661-99679993 nonsense_mediated_decay
ENST00000461920 (CYP3A5-008) 99648198-99679988 retained_intron
ENST00000463364 (CYP3A5-009) 99660219-99679966 retained_intron
ENST00000463907 (CYP3A5-004) 99670910-99679996 retained_intron
ENST00000466061 (CYP3A5-006) 99663542-99679996 retained_intron
ENST00000469622 (CYP3A5-012) 99672589-99679993 retained_intron
ENST00000469887 (CYP3A5-002) 99648198-99676576 retained_intron
ENST00000473347 (CYP3A5-010) 99658833-99663582 retained_intron
ENST00000480723 (CYP3A5-013) 99666716-99679953 processed_transcript
ENST00000481825 (CYP3A5-005) 99660228-99679996 retained_intron
ENST00000488187 (CYP3A5-014) 99652291-99660602 retained_intron
ENST00000489231 (CYP3A5-007) 99674226-99679993 retained_intron
ENSG00000197037 (ZSCAN25)
zinc finger and SCAN domain containing 25 		ENST00000262941 (ZSCAN25-201) 99619625-99630271 protein_coding
ENST00000334715 (ZSCAN25-202) 99619550-99632407 protein_coding
ENST00000394150 (ZSCAN25-002) 99616948-99630904 nonsense_mediated_decay
ENST00000394152 (ZSCAN25-001) 99616948-99632407 protein_coding
ENST00000431485 (ZSCAN25-005) 99616966-99619816 protein_coding
ENST00000466948 (ZSCAN25-008) 99619665-99630908 processed_transcript
ENST00000473646 (ZSCAN25-006) 99616953-99624484 retained_intron
ENST00000481424 (ZSCAN25-003) 99616946-99632399 retained_intron
ENST00000485586 (ZSCAN25-004) 99621061-99632371 retained_intron
ENST00000493443 (ZSCAN25-007) 99616953-99629468 processed_transcript
ENSG00000224448 (GS1-259H13.7)
 ENST00000455459 (GS1-259H13.7-001) 99638242-99638767 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0004TG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070420-ENSMUSG00000070419 CGP 10090 5:145283343-145390512
GeneTranscriptPositionBiotype
ENSMUSG00000070419 (Cyp3a57)
cytochrome P450, family 3, subfamily a, polypeptide 57 		ENSMUST00000079268 (Cyp3a57-001) 145345287-145390512 protein_coding
ENSMUST00000174696 (Cyp3a57-002) 145345279-145390512 nonsense_mediated_decay
ENSMUSG00000070420 (Zscan25)
zinc finger and SCAN domain containing 25 		ENSMUST00000094116 (Zscan25-201) 145283343-145291469 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TG_0001ENSG00000106258ENST00000222982ENST00000339843ENST00000439761ENST00000456417ENST00000461920ENST00000463364ENST00000463907ENST00000466061ENST00000469622ENST00000469887ENST00000473347ENST00000480723ENST00000481825ENST00000488187ENST00000489231ENSG00000197037ENST00000262941ENST00000334715ENST00000394150ENST00000394152ENST00000431485ENST00000466948ENST00000473646ENST00000481424ENST00000485586ENST00000493443ENSG00000224448ENST00000455459CIL_0004TG_0002ENSMUSG00000070419ENSMUST00000079268ENSMUST00000174696ENSMUSG00000070420ENSMUST00000094116
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TG_0001ENSG00000106258ENST00000222982ENST00000439761ENST00000463364ENST00000463907ENST00000466061ENST00000469622ENST00000469887ENST00000473347ENST00000480723ENST00000481825ENST00000489231ENSG00000197037ENST00000262941ENST00000334715ENST00000394150ENST00000394152ENST00000431485ENST00000466948ENST00000481424ENST00000485586ENSG00000224448ENST00000455459CIL_0004TG_0002ENSMUSG00000070419ENSMUST00000079268ENSMUST00000174696ENSMUSG00000070420ENSMUST00000094116
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106258 ENST00000222982 1.026±0.00 N/A N/A N/A 0.400±0.00 4.946±3.77 N/A 3.957±0.00 29.869±0.00 4.486±0.00 N/A 2.682±1.25 1.641±0.45 N/A
ENST00000339843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A 0.184±0.00 N/A
ENST00000456417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463364 N/A N/A N/A N/A 3.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463907 N/A 0.205±0.00 N/A N/A N/A N/A N/A 29.815±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466061 N/A N/A N/A N/A N/A N/A N/A N/A 1.468±0.00 N/A N/A 4.136±0.00 0.038±0.00 N/A
ENST00000469622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.950±0.00 N/A
ENST00000469887 N/A N/A 1.273±0.00 N/A N/A N/A N/A 10.899±0.00 N/A 1.963±0.00 N/A 1.210±0.00 N/A N/A
ENST00000473347 1.954±0.00 N/A N/A 0.993±0.00 0.776±0.00 1.590±0.00 N/A 7.749±4.63 21.192±0.00 1.378±0.00 0.157±0.00 3.913±0.00 0.038±0.00 0.359±0.00
ENST00000480723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A
ENST00000481825 N/A N/A N/A N/A 2.351±0.00 N/A N/A 17.082±0.00 N/A N/A N/A 1.304±0.00 N/A N/A
ENST00000488187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489231 N/A N/A N/A N/A N/A N/A N/A 59.652±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000197037 ENST00000262941 1.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.00 N/A
ENST00000334715 0.552±0.00 2.388±0.00 N/A 1.275±0.00 0.870±0.00 1.003±0.00 N/A 0.975±0.00 0.404±0.00 1.024±0.00 0.581±0.00 2.446±0.65 1.200±0.13 2.430±0.00
ENST00000394150 N/A N/A N/A 0.384±0.00 0.469±0.00 1.693±0.00 0.602±0.00 0.908±0.00 1.658±0.00 N/A 0.373±0.00 1.834±0.00 N/A 1.235±0.00
ENST00000394152 N/A N/A 0.180±0.00 0.889±0.00 0.916±0.07 N/A 0.539±0.01 N/A 0.671±0.21 0.770±0.00 0.317±0.00 1.249±0.35 1.159±0.00 0.791±0.00
ENST00000431485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.243±0.00 N/A N/A N/A
ENST00000466948 N/A N/A N/A N/A 1.966±0.00 N/A 2.159±0.00 N/A N/A N/A 1.975±0.00 N/A N/A N/A
ENST00000473646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481424 N/A 0.514±0.00 N/A 0.232±0.05 N/A N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A N/A
ENST00000485586 N/A 0.408±0.00 N/A 0.365±0.00 0.320±0.00 N/A N/A N/A N/A 0.546±0.00 N/A 0.529±0.00 N/A N/A
ENST00000493443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224448 ENST00000455459 N/A 0.162±0.00 2.755±0.00 0.046±0.00 0.184±0.14 0.710±0.00 0.318±0.09 0.106±0.02 0.089±0.05 0.121±0.00 0.035±0.00 2.059±0.00 0.068±0.00 0.074±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070419 ENSMUST00000079268 N/A N/A 4.520±1.76 N/A N/A N/A N/A N/A 0.355±0.25 N/A N/A 0.002±0.00 0.099±0.00 0.186±0.04
ENSMUST00000174696 0.369±0.14 N/A N/A N/A N/A N/A N/A N/A 0.052±0.03 0.042±0.00 N/A 0.036±0.03 0.100±0.09 0.072±0.02
ENSMUSG00000070420 ENSMUST00000094116 2.207±1.08 3.886±0.93 5.666±0.00 4.611±0.83 4.226±0.21 4.579±1.76 1.641±0.61 1.188±0.18 1.621±0.80 2.758±1.16 1.506±0.90 4.939±2.40 5.646±3.08 0.862±0.32

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