C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase long-chain family member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197142 ACSL5 9606 + 10:112374018-112428380 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354273 ACSL5-001 112376199-112428380 protein_coding
  ENST00000354655 ACSL5-002 112374018-112428376 protein_coding
  ENST00000356116 ACSL5-201 112376198-112428379 protein_coding
  ENST00000393081 ACSL5-202 112375265-112428379 protein_coding
  ENST00000433418 ACSL5-203 112376198-112428379 protein_coding
  ENST00000467340 ACSL5-006 112411383-112417938 processed_transcript
  ENST00000479936 ACSL5-003 112375235-112408521 processed_transcript
  ENST00000495539 ACSL5-004 112409533-112421626 processed_transcript
  ENST00000496328 ACSL5-005 112421981-112426608 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354273ENST00000354655ENST00000356116ENST00000433418ENST00000496328
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354273 9.281±0.00 6.095±0.00 0.176±0.00 1.077±0.19 3.147±0.00 4.251±0.00 1.470±0.00 2.674±0.00 9.907±3.47 8.625±0.00 0.131±0.00 29.704±28.26 3.136±0.72 7.244±0.00
ENST00000354655 N/A N/A N/A N/A N/A N/A N/A N/A 6.974±0.00 N/A N/A 4.001±0.00 N/A 2.946±0.00
ENST00000356116 4.562±0.00 2.990±0.00 0.187±0.00 1.192±0.00 5.933±2.76 14.113±9.90 1.406±0.00 2.606±0.00 8.400±0.00 8.004±0.32 0.123±0.00 15.421±3.95 3.835±0.51 3.378±0.00
ENST00000433418 N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A 2.963±0.00 N/A N/A N/A N/A
ENST00000496328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.517±0.00 220.198±0.00 10.088±0.00 15.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093P CIL_00093P_0001 VISTA 10:112343926-112944807
CIL_0002FP CIL_0002FP_0001 CGP 10:112374018-112446914

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005743 IEA mitochondrial inner membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019432 TAS triglyceride biosynthetic process
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:2001236 IDA regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075931 acsl5 acyl-CoA synthetase long-chain family member 5 protein_coding Danio_rerio
ENSMUSG00000024981 Acsl5 acyl-CoA synthetase long-chain family member 5 protein_coding Mus_musculus

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