C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00093P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs328 VISTA 9606 10:112343926-112944807
GeneTranscriptPositionBiotype
ENSG00000023041 (ZDHHC6)
zinc finger, DHHC-type containing 6 		ENST00000369404 (ZDHHC6-002) 112430724-112446901 protein_coding
ENST00000369405 (ZDHHC6-001) 112430300-112446914 protein_coding
ENST00000471035 (ZDHHC6-004) 112430824-112433570 processed_transcript
ENST00000482410 (ZDHHC6-003) 112430809-112433485 processed_transcript
ENSG00000151532 (VTI1A)
vesicle transport through interaction with t-SNAREs 1A 		ENST00000393077 (VTI1A-001) 112447258-112818744 protein_coding
ENST00000432306 (VTI1A-009) 112447258-112737784 protein_coding
ENST00000472892 (VTI1A-003) 112446999-112449659 processed_transcript
ENST00000480057 (VTI1A-006) 112447359-112527405 processed_transcript
ENST00000483122 (VTI1A-002) 112446998-112450726 processed_transcript
ENST00000489142 (VTI1A-005) 112447234-112485291 processed_transcript
ENST00000489357 (VTI1A-007) 112447349-112538301 processed_transcript
ENST00000494728 (VTI1A-004) 112447276-112464758 processed_transcript
ENST00000496445 (VTI1A-008) 112447264-112538646 processed_transcript
ENSG00000197142 (ACSL5)
acyl-CoA synthetase long-chain family member 5 		ENST00000354273 (ACSL5-001) 112376199-112428380 protein_coding
ENST00000354655 (ACSL5-002) 112374018-112428376 protein_coding
ENST00000356116 (ACSL5-201) 112376198-112428379 protein_coding
ENST00000393081 (ACSL5-202) 112375265-112428379 protein_coding
ENST00000433418 (ACSL5-203) 112376198-112428379 protein_coding
ENST00000467340 (ACSL5-006) 112411383-112417938 processed_transcript
ENST00000479936 (ACSL5-003) 112375235-112408521 processed_transcript
ENST00000495539 (ACSL5-004) 112409533-112421626 processed_transcript
ENST00000496328 (ACSL5-005) 112421981-112426608 processed_transcript
ENSG00000225292 (RP11-57H14.3)
 ENST00000428766 (RP11-57H14.3-001) 112888735-112906111 sense_intronic
ENSG00000232934 (RP11-324O2.3)
 ENST00000449782 (RP11-324O2.3-003) 112406171-112409490 antisense
ENST00000594870 (RP11-324O2.3-001) 112406294-112409494 antisense
ENST00000598447 (RP11-324O2.3-002) 112406274-112409490 antisense
ENSG00000233340 (RP11-25C19.3)
 ENST00000443652 (RP11-25C19.3-001) 112671812-112677819 antisense
ENSG00000234017 (RP11-214N15.5)
 ENST00000430685 (RP11-214N15.5-001) 112548632-112548872 processed_pseudogene
ENSG00000243316 (GUCY2GP)
guanylate cyclase 2G, pseudogene 		ENST00000479705 (GUCY2GP-001) 112308181-112356574 unitary_pseudogene
ENST00000490269 (GUCY2GP-003) 112308219-112339099 processed_transcript
ENSG00000260917 (RP11-57H14.4)
 ENST00000564352 (RP11-57H14.4-001) 112823490-112827726 sense_overlapping
ENSG00000264763 (MIR4295)
microRNA 4295 		ENST00000585286 (MIR4295-201) 112634170-112634254 miRNA
ENSG00000270599 (RP11-324O2.6)
 ENST00000424422 (RP11-324O2.6-001) 112412295-112420007 antisense
ENSG00000279315 (RP11-57H14.5)
 ENST00000624062 (RP11-57H14.5-001) 112831169-112832454 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_00093P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs328 VISTA 10090 19:55176600-55777537
GeneTranscriptPositionBiotype
ENSMUSG00000024979 (Tectb)
tectorin beta 		ENSMUST00000025936 (Tectb-001) 55180885-55196313 protein_coding
ENSMUST00000120936 (Tectb-004) 55180736-55194869 protein_coding
ENSMUST00000123763 (Tectb-005) 55189630-55190324 retained_intron
ENSMUST00000124545 (Tectb-006) 55189578-55194694 protein_coding
ENSMUST00000148123 (Tectb-002) 55192033-55196304 processed_transcript
ENSMUST00000154886 (Tectb-003) 55180733-55189665 protein_coding
ENSMUSG00000024981 (Acsl5)
acyl-CoA synthetase long-chain family member 5 		ENSMUST00000043150 (Acsl5-201) 55253369-55296627 protein_coding
ENSMUSG00000024982 (Zdhhc6)
zinc finger, DHHC domain containing 6 		ENSMUST00000076891 (Zdhhc6-201) 55298301-55316032 protein_coding
ENSMUSG00000024983 (Vti1a)
vesicle transport through interaction with t-SNAREs 1A 		ENSMUST00000095950 (Vti1a-201) 55316351-55626561 protein_coding
ENSMUSG00000024985 (Tcf7l2)
transcription factor 7 like 2, T cell specific, HMG box 		ENSMUST00000041717 (Tcf7l2-012) 55741820-55933252 protein_coding
ENSMUST00000061496 (Tcf7l2-201) 55741810-55933654 protein_coding
ENSMUST00000111646 (Tcf7l2-007) 55895510-55933229 protein_coding
ENSMUST00000111649 (Tcf7l2-002) 55742243-55912722 protein_coding
ENSMUST00000111651 (Tcf7l2-004) 55742243-55912723 protein_coding
ENSMUST00000111652 (Tcf7l2-003) 55742242-55912723 protein_coding
ENSMUST00000111653 (Tcf7l2-010) 55742269-55925236 protein_coding
ENSMUST00000111654 (Tcf7l2-011) 55741884-55925239 protein_coding
ENSMUST00000111656 (Tcf7l2-006) 55742332-55933654 protein_coding
ENSMUST00000111657 (Tcf7l2-202) 55741810-55933654 protein_coding
ENSMUST00000111658 (Tcf7l2-001) 55741884-55932715 protein_coding
ENSMUST00000111659 (Tcf7l2-009) 55742058-55932209 protein_coding
ENSMUST00000111662 (Tcf7l2-203) 55741820-55933229 protein_coding
ENSMUST00000126434 (Tcf7l2-013) 55742269-55910549 retained_intron
ENSMUST00000127233 (Tcf7l2-008) 55742364-55933231 protein_coding
ENSMUST00000127653 (Tcf7l2-017) 55895662-55912637 processed_transcript
ENSMUST00000133008 (Tcf7l2-014) 55742845-55910681 retained_intron
ENSMUST00000142291 (Tcf7l2-018) 55894534-55918966 protein_coding
ENSMUST00000143334 (Tcf7l2-016) 55898309-55919041 processed_transcript
ENSMUST00000145249 (Tcf7l2-019) 55893352-55919618 processed_transcript
ENSMUST00000148666 (Tcf7l2-015) 55898553-55919604 protein_coding
ENSMUST00000153888 (Tcf7l2-005) 55742468-55932209 protein_coding
ENSMUSG00000055523 (Gucy2g)
guanylate cyclase 2g 		ENSMUST00000069183 (Gucy2g-001) 55198297-55241236 protein_coding
ENSMUSG00000097632 (4930552P12Rik)
RIKEN cDNA 4930552P12 gene 		ENSMUST00000181198 (4930552P12Rik-201) 55640589-55702204 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00093P_0001ENSG00000023041ENST00000369404ENST00000369405ENST00000471035ENST00000482410ENSG00000151532ENST00000393077ENST00000432306ENST00000472892ENST00000480057ENST00000483122ENST00000489142ENST00000489357ENST00000494728ENST00000496445ENSG00000197142ENST00000354273ENST00000354655ENST00000356116ENST00000393081ENST00000433418ENST00000467340ENST00000479936ENST00000495539ENST00000496328ENSG00000225292ENST00000428766ENSG00000232934ENST00000449782ENST00000594870ENST00000598447ENSG00000233340ENST00000443652ENSG00000234017ENST00000430685ENSG00000243316ENST00000479705ENST00000490269ENSG00000260917ENST00000564352ENSG00000264763ENST00000585286ENSG00000270599ENST00000424422ENSG00000279315ENST00000624062CIL_00093P_0002ENSMUSG00000024979ENSMUST00000025936ENSMUST00000120936ENSMUST00000123763ENSMUST00000124545ENSMUST00000148123ENSMUST00000154886ENSMUSG00000024981ENSMUST00000043150ENSMUSG00000024982ENSMUST00000076891ENSMUSG00000024983ENSMUST00000095950ENSMUSG00000024985ENSMUST00000041717ENSMUST00000061496ENSMUST00000111646ENSMUST00000111649ENSMUST00000111651ENSMUST00000111652ENSMUST00000111653ENSMUST00000111654ENSMUST00000111656ENSMUST00000111657ENSMUST00000111658ENSMUST00000111659ENSMUST00000111662ENSMUST00000126434ENSMUST00000127233ENSMUST00000127653ENSMUST00000133008ENSMUST00000142291ENSMUST00000143334ENSMUST00000145249ENSMUST00000148666ENSMUST00000153888ENSMUSG00000055523ENSMUST00000069183ENSMUSG00000097632ENSMUST00000181198
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000023041 ENST00000369404 N/A N/A N/A N/A 1.016±0.00 3.078±0.00 N/A N/A N/A 1.089±0.00 0.838±0.00 N/A N/A N/A
ENST00000369405 4.458±0.00 5.054±0.00 4.105±0.00 4.317±0.20 5.394±1.49 5.216±3.04 4.434±0.00 13.006±10.89 5.255±1.97 5.177±1.85 1.021±0.81 15.703±13.16 12.977±4.91 8.073±0.17
ENST00000471035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482410 N/A 4.159±0.00 N/A N/A N/A N/A N/A N/A N/A 4.571±0.00 N/A N/A N/A N/A
ENSG00000151532 ENST00000393077 3.813±0.00 2.757±0.00 1.484±0.00 2.410±0.07 3.806±0.36 2.557±0.60 1.818±0.49 3.015±1.59 2.271±0.94 2.333±0.13 1.582±0.62 2.424±1.00 2.332±0.17 2.949±0.30
ENST00000432306 N/A N/A 2.247±0.00 N/A N/A N/A 1.254±0.00 N/A N/A 1.868±0.00 N/A 2.001±0.00 N/A N/A
ENST00000472892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483122 N/A 1.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.400±0.77 N/A N/A
ENST00000489142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489357 N/A N/A N/A 7.389±0.00 N/A N/A N/A 3.013±0.00 N/A N/A 1.674±0.00 8.490±0.00 7.403±0.00 14.212±0.00
ENST00000494728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496445 N/A N/A N/A N/A 6.563±0.00 5.051±0.00 N/A N/A N/A 4.390±0.00 N/A 5.225±0.00 N/A N/A
ENSG00000197142 ENST00000354273 9.281±0.00 6.095±0.00 0.176±0.00 1.077±0.19 3.147±0.00 4.251±0.00 1.470±0.00 2.674±0.00 9.907±3.47 8.625±0.00 0.131±0.00 29.704±28.26 3.136±0.72 7.244±0.00
ENST00000354655 N/A N/A N/A N/A N/A N/A N/A N/A 6.974±0.00 N/A N/A 4.001±0.00 N/A 2.946±0.00
ENST00000356116 4.562±0.00 2.990±0.00 0.187±0.00 1.192±0.00 5.933±2.76 14.113±9.90 1.406±0.00 2.606±0.00 8.400±0.00 8.004±0.32 0.123±0.00 15.421±3.95 3.835±0.51 3.378±0.00
ENST00000393081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433418 N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A 2.963±0.00 N/A N/A N/A N/A
ENST00000467340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.517±0.00 220.198±0.00 10.088±0.00 15.503±0.00
ENSG00000225292 ENST00000428766 0.975±0.00 1.888±0.00 N/A 1.019±0.00 0.149±0.00 0.380±0.09 0.501±0.12 N/A 0.486±0.00 0.530±0.00 0.928±0.00 0.334±0.00 N/A 0.450±0.25
ENSG00000232934 ENST00000449782 N/A N/A 0.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233340 ENST00000443652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 0.232±0.00 0.196±0.00
ENSG00000234017 ENST00000430685 4.348±0.00 4.545±0.00 N/A 1.703±0.00 2.846±0.00 3.950±0.00 0.417±0.00 2.610±0.00 1.636±0.93 2.288±0.00 1.080±0.00 5.476±5.22 N/A 2.737±0.00
ENSG00000243316 ENST00000479705 N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.011±0.00 N/A 0.095±0.00
ENST00000490269 N/A N/A N/A N/A 0.026±0.00 N/A N/A 0.025±0.00 N/A 0.123±0.00 N/A 0.076±0.00 N/A 0.266±0.00
ENSG00000260917 ENST00000564352 0.635±0.00 1.557±0.00 0.599±0.00 1.826±0.94 1.070±0.81 0.744±0.32 0.883±0.72 1.482±1.15 0.478±0.01 0.479±0.10 0.844±0.18 0.819±0.41 0.385±0.25 0.994±0.19
ENSG00000264763 ENST00000585286 N/A N/A N/A N/A N/A N/A N/A N/A 0.895±0.00 N/A N/A N/A N/A N/A
ENSG00000270599 ENST00000424422 0.171±0.00 0.812±0.00 N/A N/A 0.254±0.00 0.074±0.00 0.045±0.00 0.227±0.00 0.043±0.00 2.130±0.00 0.129±0.00 0.219±0.10 0.081±0.00 0.181±0.00
ENSG00000279315 ENST00000624062 N/A 0.023±0.00 0.101±0.00 0.028±0.00 0.430±0.39 0.148±0.00 0.076±0.00 N/A 0.050±0.00 0.287±0.00 0.887±0.00 0.050±0.02 0.036±0.00 0.071±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024979 ENSMUST00000025936 0.061±0.00 N/A N/A 0.015±0.00 0.042±0.01 N/A 0.074±0.00 N/A N/A 0.038±0.00 N/A N/A N/A 0.037±0.00
ENSMUST00000120936 N/A 0.051±0.00 N/A N/A 0.112±0.00 0.047±0.00 N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENSMUST00000123763 N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A 0.083±0.00 0.142±0.00 N/A N/A N/A
ENSMUST00000124545 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.092±0.00 N/A N/A N/A 0.124±0.05
ENSMUST00000148123 0.085±0.04 0.116±0.06 0.072±0.01 0.079±0.00 0.113±0.05 N/A 0.090±0.04 0.035±0.02 0.067±0.06 0.088±0.03 0.022±0.01 0.082±0.03 0.077±0.09 0.090±0.05
ENSMUST00000154886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00
ENSMUSG00000024981 ENSMUST00000043150 9.105±2.42 6.814±4.58 13.399±1.20 8.610±8.07 13.016±6.79 9.928±1.31 2.953±0.45 8.395±1.93 24.139±9.84 19.523±7.18 1.379±0.66 8.130±7.64 12.456±6.83 2.729±1.81
ENSMUSG00000024982 ENSMUST00000076891 3.719±1.17 5.253±0.56 6.827±1.88 7.384±1.54 4.665±1.99 1.881±1.50 3.314±0.49 5.255±4.10 8.040±4.61 2.697±1.87 2.175±0.81 2.503±2.97 11.202±0.84 3.816±1.95
ENSMUSG00000024983 ENSMUST00000095950 4.491±0.75 5.035±0.46 6.348±1.30 8.951±4.08 4.411±0.81 3.559±0.56 2.215±0.44 4.015±1.23 3.131±1.80 4.392±1.82 3.975±0.34 5.119±1.23 5.000±1.26 1.255±0.71
ENSMUSG00000024985 ENSMUST00000041717 2.102±0.42 N/A 2.042±0.70 N/A 2.452±0.68 8.551±1.90 1.355±0.83 2.070±0.68 1.542±0.48 3.119±0.56 0.296±0.00 3.294±0.91 1.071±0.55 0.985±0.54
ENSMUST00000061496 2.003±0.17 0.812±0.00 3.614±0.75 14.527±5.41 2.066±0.68 6.568±1.70 0.754±0.00 1.198±0.15 1.261±0.31 2.033±0.48 0.276±0.13 1.564±0.28 1.922±0.86 0.990±0.31
ENSMUST00000111646 N/A N/A N/A 31.149±22.83 3.016±0.00 N/A N/A N/A 2.123±0.00 N/A N/A 1.384±0.00 0.472±0.00 N/A
ENSMUST00000111649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111656 N/A N/A N/A 19.914±14.58 N/A N/A N/A N/A 1.762±0.18 N/A 0.364±0.14 N/A N/A N/A
ENSMUST00000111657 N/A N/A 1.528±0.00 N/A N/A N/A 0.821±0.17 N/A 3.680±0.00 N/A 0.242±0.08 N/A 1.073±0.21 N/A
ENSMUST00000111658 N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111659 1.503±0.00 2.095±0.30 N/A N/A 3.224±0.66 N/A N/A N/A N/A N/A N/A 3.048±0.91 N/A N/A
ENSMUST00000111662 N/A N/A N/A N/A 1.538±0.00 N/A N/A N/A N/A N/A N/A 1.752±0.78 N/A N/A
ENSMUST00000126434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127233 N/A 1.697±0.17 N/A 0.746±0.00 N/A N/A N/A 1.863±0.32 N/A N/A 0.369±0.00 N/A N/A N/A
ENSMUST00000127653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.667±0.00
ENSMUST00000148666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153888 4.411±0.76 5.033±0.55 2.063±0.00 N/A 7.419±0.80 25.891±4.43 1.551±0.47 3.719±0.91 2.851±0.84 5.466±1.46 N/A 9.758±4.45 1.763±0.37 1.162±0.14
ENSMUSG00000055523 ENSMUST00000069183 N/A 0.031±0.02 N/A 0.191±0.24 0.127±0.04 0.097±0.02 0.054±0.01 N/A 0.022±0.02 0.111±0.00 0.144±0.04 0.511±0.28 0.049±0.02 0.301±0.16
ENSMUSG00000097632 ENSMUST00000181198 0.037±0.02 0.068±0.04 0.070±0.00 0.060±0.00 0.071±0.03 0.131±0.06 0.148±0.08 0.017±0.01 0.036±0.02 0.031±0.01 0.235±0.05 0.101±0.07 0.034±0.02 0.411±0.18

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