C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354273 ACSL5-001 ENSG00000197142 9606 + 10:112376199-112428380 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354273
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354273 9.281±0.00 6.095±0.00 0.176±0.00 1.077±0.19 3.147±0.00 4.251±0.00 1.470±0.00 2.674±0.00 9.907±3.47 8.625±0.00 0.131±0.00 29.704±28.26 3.136±0.72 7.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093P CIL_00093P_0001 VISTA 10:112343926-112944807
CIL_0002FP CIL_0002FP_0001 CGP 10:112374018-112446914

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019432 TAS triglyceride biosynthetic process
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:2001236 IDA regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043150 Acsl5-201 protein_coding Mus_musculus 0 2030

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