C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: piwi-like RNA-mediated gene silencing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197181 PIWIL2 9606 + 8:22275297-22357563 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356766 PIWIL2-001 22275297-22357563 protein_coding
  ENST00000454009 PIWIL2-003 22275567-22355516 protein_coding
  ENST00000519884 PIWIL2-004 22352799-22356088 retained_intron
  ENST00000521356 PIWIL2-002 22275337-22356071 protein_coding
  ENST00000611073 PIWIL2-201 22279362-22355530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000356766ENST00000454009ENST00000519884ENST00000521356ENST00000611073
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000356766 0.213±0.00 0.098±0.00 0.111±0.00 0.431±0.00 0.139±0.00 0.108±0.00 0.099±0.00 0.079±0.00 N/A 0.193±0.16 0.047±0.00 13.758±1.35
ENST00000454009 N/A N/A N/A 0.136±0.00 0.081±0.00 0.074±0.00 N/A N/A N/A 0.128±0.00 N/A N/A
ENST00000519884 N/A N/A N/A N/A 0.134±0.00 0.042±0.00 N/A N/A 0.217±0.00 0.054±0.00 N/A N/A
ENST00000521356 N/A 0.082±0.00 0.092±0.00 N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.026±0.00 N/A
ENST00000611073 N/A N/A 0.142±0.00 0.253±0.00 N/A N/A N/A 0.238±0.01 N/A 0.129±0.00 0.030±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000966 ISS RNA 5'-end processing
GO:0003676 IEA nucleic acid binding
GO:0003729 IEA mRNA binding
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005844 IEA polysome
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030718 ISS germ-line stem cell maintenance
GO:0031047 ISS gene silencing by RNA
GO:0033391 ISS chromatoid body
GO:0034584 ISS piRNA binding
GO:0034587 ISS piRNA metabolic process
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0043186 ISS P granule
GO:0045727 ISS positive regulation of translation
GO:0048477 ISS oogenesis
GO:0051321 IEA meiotic cell cycle
GO:0060903 IEA positive regulation of meiosis I
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062601 piwil2 piwi-like 2 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000033644 Piwil2 piwi-like RNA-mediated gene silencing 2 protein_coding Mus_musculus

Loading