C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: supervillin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197321 SVIL 9606 - 10:29457338-29736781 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355867 SVIL-003 29458059-29634972 protein_coding
  ENST00000375398 SVIL-201 29457348-29634972 protein_coding
  ENST00000375400 SVIL-001 29457338-29735804 protein_coding
  ENST00000460007 SVIL-011 29473534-29481655 processed_transcript
  ENST00000464726 SVIL-004 29657870-29686640 processed_transcript
  ENST00000464984 SVIL-007 29508031-29522568 processed_transcript
  ENST00000465422 SVIL-002 29686553-29736781 processed_transcript
  ENST00000474106 SVIL-009 29490847-29496490 processed_transcript
  ENST00000482607 SVIL-010 29484687-29486307 processed_transcript
  ENST00000483758 SVIL-013 29555090-29647255 processed_transcript
  ENST00000490031 SVIL-006 29670982-29686622 processed_transcript
  ENST00000491872 SVIL-008 29494980-29508536 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355867ENST00000375398ENST00000375400ENST00000482607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355867 2.096±0.00 N/A 0.911±0.00 N/A 4.097±0.00 3.980±0.00 17.337±8.01 N/A 13.189±0.00 2.392±0.20 74.662±47.45 3.654±0.79 N/A N/A
ENST00000375398 N/A N/A N/A N/A 3.074±0.65 N/A N/A N/A N/A N/A N/A 5.416±0.00 N/A N/A
ENST00000375400 11.419±0.00 8.962±0.00 3.745±0.00 1.066±0.42 7.498±3.51 12.630±6.92 N/A 4.679±0.00 0.575±0.00 7.034±0.24 N/A 13.515±8.94 5.402±2.84 6.164±4.55
ENST00000482607 N/A N/A 44.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G9 CIL_0002G9_0002 CGP 10:29457338-30115494

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007010 IEA cytoskeleton organization
GO:0007519 IMP skeletal muscle tissue development
GO:0015629 IDA actin cytoskeleton
GO:0042995 IEA cell projection
GO:0043034 IDA costamere
GO:0051015 IDA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014651 svilb supervillin b protein_coding Danio_rerio
ENSDARG00000055075 svila supervillin a protein_coding Danio_rerio
ENSMUSG00000024236 Svil supervillin protein_coding Mus_musculus

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