C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 180
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197816 CCDC180 9606 + 9:97307304-97378524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000460482 CCDC180-007 97307361-97345813 processed_transcript
  ENST00000471314 CCDC180-003 97354617-97358026 processed_transcript
  ENST00000472746 CCDC180-004 97307304-97309493 retained_intron
  ENST00000483504 CCDC180-014 97365165-97369944 processed_transcript
  ENST00000487976 CCDC180-006 97371872-97376933 retained_intron
  ENST00000494917 CCDC180-002 97307321-97343643 retained_intron
  ENST00000526038 CCDC180-008 97369278-97378524 retained_intron
  ENST00000527182 CCDC180-013 97362295-97364659 processed_transcript
  ENST00000528678 CCDC180-009 97330398-97350503 processed_transcript
  ENST00000529487 CCDC180-001 97307659-97376933 protein_coding
  ENST00000530011 CCDC180-010 97330533-97350554 processed_transcript
  ENST00000530551 CCDC180-012 97371340-97376818 retained_intron
  ENST00000534189 CCDC180-011 97370013-97371975 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000460482ENST00000487976ENST00000494917ENST00000526038ENST00000527182ENST00000529487ENST00000534189
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000460482 0.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A
ENST00000487976 N/A N/A N/A 0.536±0.24 0.129±0.00 0.318±0.00 N/A N/A 0.736±0.14 0.059±0.00 N/A
ENST00000494917 N/A N/A N/A N/A 0.518±0.00 N/A N/A N/A N/A N/A N/A
ENST00000526038 N/A 0.346±0.00 N/A N/A 0.056±0.00 N/A N/A 0.035±0.00 0.316±0.04 N/A N/A
ENST00000527182 N/A N/A N/A N/A N/A N/A N/A 0.558±0.00 N/A N/A N/A
ENST00000529487 0.161±0.00 0.787±0.00 0.737±0.19 0.358±0.00 N/A N/A 1.427±0.00 N/A 1.385±0.28 0.190±0.02 18.716±5.62
ENST00000534189 N/A N/A N/A N/A N/A N/A N/A N/A 3.345±0.00 1.289±0.00 110.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JB CIL_0002JB_0001 CGP 9:97307304-97496125

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032372 CCDC180 coiled-coil domain containing 180 protein_coding Danio_rerio
ENSMUSG00000035539 E230008N13Rik RIKEN cDNA E230008N13 gene protein_coding Mus_musculus

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